Detailed information NTG0105442

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: R9B17_RS05625
• Genome accession: NZ_AP028399
• Coordinates: 1088706..1089665 (+)
• Length: 319 a.a.
• NCBI ID: WP_032586265.1
• Uniprot ID: A0A5Y8BL20
• Organism: Campylobacter jejuni strain BCH-11515
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1083706..1094665

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R9B17_RS05595 (B11515_11060)	neuC	1084296..1085420 (+)	1125	WP_002859249.1	UDP-N-acetylglucosamine 2-epimerase	-
R9B17_RS05600 (B11515_11070)	-	1085413..1085911 (+)	499	Protein_1081	beta-1,4-N-acetylgalactosaminyltransferase	-
R9B17_RS05605 (B11515_11080)	-	1085979..1086359 (+)	381	WP_186821394.1	hypothetical protein	-
R9B17_RS05610 (B11515_11090)	-	1086356..1087021 (+)	666	WP_002935341.1	cytidylyltransferase domain-containing protein	-
R9B17_RS05615 (B11515_11100)	-	1087145..1087843 (+)	699	WP_228589016.1	CatB-related O-acetyltransferase	-
R9B17_RS05620 (B11515_11110)	waaV	1087835..1088647 (-)	813	WP_002935342.1	glycosyltransferase family 2 protein	-
R9B17_RS05625 (B11515_11120)	waaF	1088706..1089665 (+)	960	WP_032586265.1	glycosyltransferase family 9 protein	Regulator
R9B17_RS05630 (B11515_11130)	gmhA	1089646..1090206 (-)	561	WP_023890815.1	D-sedoheptulose 7-phosphate isomerase	-
R9B17_RS05635 (B11515_11140)	rfaE1	1090203..1091588 (-)	1386	WP_032586263.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
R9B17_RS05640 (B11515_11150)	rfaD	1091581..1092534 (-)	954	WP_002860242.1	ADP-glyceromanno-heptose 6-epimerase	-
R9B17_RS05645 (B11515_11160)	gmhB	1092535..1093096 (-)	562	Protein_1090	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
R9B17_RS05650 (B11515_11170)	-	1093177..1093479 (+)	303	WP_002852762.1	c-type cytochrome	-
R9B17_RS05655 (B11515_11180)	ccoS	1093502..1093708 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36740.49 Da
• Isoelectric Point: 10.3923

>NTDB_id=105442 R9B17_RS05625 WP_032586265.1 1088706..1089665(+) (waaF) [Campylobacter jejuni strain BCH-11515]
MKIFIHLPTWLGDAVMASLALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGINPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKVEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKICPLKHHKCMKDLKPKRVIEEARNLLKNPHL

Nucleotide

• Length: 960 bp

>NTDB_id=105442 R9B17_RS05625 WP_032586265.1 1088706..1089665(+) (waaF) [Campylobacter jejuni strain BCH-11515]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACTTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGAATCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTAGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGTCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATTGCTTTTTGTGATCTTTTCATAACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTAAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

3D structure

• AlphaFold DB: A0A5Y8BL20

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.044	100	0.94