Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R9B17_RS05280 | Genome accession | NZ_AP028399 |
| Coordinates | 1020211..1020513 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain BCH-11515 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1015211..1025513
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R9B17_RS05255 (B11515_10380) | rpsR | 1015576..1015836 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R9B17_RS05260 (B11515_10390) | lon | 1015896..1018271 (-) | 2376 | WP_317739034.1 | endopeptidase La | - |
| R9B17_RS05265 (B11515_10400) | - | 1018288..1018935 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| R9B17_RS05270 (B11515_10410) | fliW | 1019094..1019483 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R9B17_RS05275 (B11515_10420) | proC | 1019483..1020214 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R9B17_RS05280 (B11515_10430) | ctsT | 1020211..1020513 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| R9B17_RS05285 (B11515_10440) | - | 1020510..1021172 (+) | 663 | WP_002859149.1 | hypothetical protein | - |
| R9B17_RS05290 (B11515_10450) | - | 1021169..1021621 (+) | 453 | WP_002874062.1 | hypothetical protein | - |
| R9B17_RS05295 (B11515_10460) | hemD | 1021618..1022247 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| R9B17_RS05300 (B11515_10470) | thiE | 1022225..1022857 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| R9B17_RS05305 (B11515_10480) | thiD | 1022847..1023659 (-) | 813 | WP_032586361.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R9B17_RS05310 (B11515_10490) | - | 1023656..1024342 (-) | 687 | WP_032586318.1 | endonuclease III domain-containing protein | - |
| R9B17_RS05315 (B11515_10500) | - | 1024339..1025100 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=105440 R9B17_RS05280 WP_002853046.1 1020211..1020513(+) (ctsT) [Campylobacter jejuni strain BCH-11515]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=105440 R9B17_RS05280 WP_002853046.1 1020211..1020513(+) (ctsT) [Campylobacter jejuni strain BCH-11515]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |