Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | BCV20_RS00905 | Genome accession | NZ_CP170007 |
| Coordinates | 201289..201807 (+) | Length | 172 a.a. |
| NCBI ID | WP_016787693.1 | Uniprot ID | A0AAN0LPQ8 |
| Organism | Vibrio cyclitrophicus strain 10N.286.54.F4 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 196289..206807
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BCV20_RS00885 (BCV20_00885) | - | 196347..198905 (-) | 2559 | WP_198591911.1 | penicillin-binding protein 1A | - |
| BCV20_RS00890 (BCV20_00890) | pilM | 199057..200082 (+) | 1026 | WP_016787692.1 | type IV pilus assembly protein PilM | Machinery gene |
| BCV20_RS00895 (BCV20_00895) | pilN | 200066..200680 (+) | 615 | WP_010435288.1 | PilN domain-containing protein | Machinery gene |
| BCV20_RS00900 (BCV20_00900) | pilO | 200673..201302 (+) | 630 | WP_010435284.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| BCV20_RS00905 (BCV20_00905) | pilP | 201289..201807 (+) | 519 | WP_016787693.1 | pilus assembly protein PilP | Machinery gene |
| BCV20_RS00910 (BCV20_00910) | pilQ | 201867..203558 (+) | 1692 | WP_016787694.1 | type IV pilus secretin PilQ | Machinery gene |
| BCV20_RS00915 (BCV20_00915) | aroK | 203735..204253 (+) | 519 | WP_009848907.1 | shikimate kinase AroK | - |
| BCV20_RS00920 (BCV20_00920) | aroB | 204278..205366 (+) | 1089 | WP_010435273.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 19191.31 Da Isoelectric Point: 10.3202
>NTDB_id=1054360 BCV20_RS00905 WP_016787693.1 201289..201807(+) (pilP) [Vibrio cyclitrophicus strain 10N.286.54.F4]
MKPSNALYSILLLLLLSGCKANEDSLEDFVVQVEAKARKEVEQLVPASEFAAATYQRRAFRPPFELPQEAIVQNQPLVKK
NCWQPSTRARNGKLEKYPLNQLRLKGVMGSDSSVFGLVQTPIGNVVNVKKGQFIGLNNGRVTKVTSQYVLINETLPDGLG
CWHKRNVRLALK
MKPSNALYSILLLLLLSGCKANEDSLEDFVVQVEAKARKEVEQLVPASEFAAATYQRRAFRPPFELPQEAIVQNQPLVKK
NCWQPSTRARNGKLEKYPLNQLRLKGVMGSDSSVFGLVQTPIGNVVNVKKGQFIGLNNGRVTKVTSQYVLINETLPDGLG
CWHKRNVRLALK
Nucleotide
Download Length: 519 bp
>NTDB_id=1054360 BCV20_RS00905 WP_016787693.1 201289..201807(+) (pilP) [Vibrio cyclitrophicus strain 10N.286.54.F4]
ATGAAACCCAGTAACGCGCTTTATTCGATCTTGTTATTACTTTTATTGTCGGGCTGCAAAGCAAATGAGGATTCGTTAGA
AGACTTTGTTGTGCAAGTTGAGGCCAAGGCGAGGAAAGAGGTGGAACAGCTTGTTCCTGCCTCTGAGTTTGCTGCTGCCA
CTTATCAACGCCGAGCTTTTCGTCCTCCTTTTGAACTTCCTCAGGAAGCTATTGTGCAGAATCAACCTCTGGTTAAAAAA
AACTGTTGGCAGCCCAGTACTCGTGCTCGTAATGGAAAATTAGAAAAGTACCCGCTAAATCAGTTGCGTTTAAAAGGTGT
AATGGGAAGTGACTCAAGTGTATTTGGCCTTGTGCAGACGCCTATAGGTAACGTTGTGAATGTTAAGAAAGGTCAGTTCA
TCGGCTTAAACAATGGTCGAGTTACCAAGGTAACAAGCCAGTACGTTCTGATTAATGAAACTCTTCCAGATGGCTTAGGT
TGTTGGCACAAGCGCAACGTTAGGCTGGCTCTGAAGTAA
ATGAAACCCAGTAACGCGCTTTATTCGATCTTGTTATTACTTTTATTGTCGGGCTGCAAAGCAAATGAGGATTCGTTAGA
AGACTTTGTTGTGCAAGTTGAGGCCAAGGCGAGGAAAGAGGTGGAACAGCTTGTTCCTGCCTCTGAGTTTGCTGCTGCCA
CTTATCAACGCCGAGCTTTTCGTCCTCCTTTTGAACTTCCTCAGGAAGCTATTGTGCAGAATCAACCTCTGGTTAAAAAA
AACTGTTGGCAGCCCAGTACTCGTGCTCGTAATGGAAAATTAGAAAAGTACCCGCTAAATCAGTTGCGTTTAAAAGGTGT
AATGGGAAGTGACTCAAGTGTATTTGGCCTTGTGCAGACGCCTATAGGTAACGTTGTGAATGTTAAGAAAGGTCAGTTCA
TCGGCTTAAACAATGGTCGAGTTACCAAGGTAACAAGCCAGTACGTTCTGATTAATGAAACTCTTCCAGATGGCTTAGGT
TGTTGGCACAAGCGCAACGTTAGGCTGGCTCTGAAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Vibrio cholerae strain A1552 |
63.19 |
94.767 |
0.599 |
| pilP | Vibrio campbellii strain DS40M4 |
55.689 |
97.093 |
0.541 |