Detailed information NTG1054356

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BCV20_RS00785
• Genome accession: NZ_CP170007
• Coordinates: 169712..170716 (-)
• Length: 334 a.a.
• NCBI ID: WP_010435348.1
• Uniprot ID: A0AAN0LNA0
• Organism: Vibrio cyclitrophicus strain 10N.286.54.F4
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 164712..175716

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BCV20_RS00755 (BCV20_00755)	zapB	164882..165124 (+)	243	WP_010435362.1	cell division protein ZapB	-
BCV20_RS00760 (BCV20_00760)	rraA	165231..165749 (-)	519	WP_010435359.1	ribonuclease E activity regulator RraA	-
BCV20_RS00765 (BCV20_00765)	-	165823..166740 (-)	918	WP_010435357.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BCV20_RS00770 (BCV20_00770)	hslU	166896..168236 (-)	1341	WP_016767976.1	HslU--HslV peptidase ATPase subunit	-
BCV20_RS00775 (BCV20_00775)	hslV	168295..168843 (-)	549	WP_004729692.1	ATP-dependent protease subunit HslV	-
BCV20_RS00780 (BCV20_00780)	-	169050..169589 (-)	540	WP_010435351.1	SPOR domain-containing protein	-
BCV20_RS00785 (BCV20_00785)	cytR	169712..170716 (-)	1005	WP_010435348.1	DNA-binding transcriptional regulator CytR	Regulator
BCV20_RS00790 (BCV20_00790)	priA	170957..173158 (-)	2202	WP_016767977.1	primosomal protein N'	-
BCV20_RS00795 (BCV20_00795)	rpmE	173490..173708 (+)	219	WP_004737142.1	50S ribosomal protein L31	-
BCV20_RS00800 (BCV20_00800)	-	174040..175329 (+)	1290	WP_016787689.1	malic enzyme-like NAD(P)-binding protein	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36507.05 Da
• Isoelectric Point: 6.4911

>NTDB_id=1054356 BCV20_RS00785 WP_010435348.1 169712..170716(-) (cytR) [Vibrio cyclitrophicus strain 10N.286.54.F4]
MATMKDVAQLAGVSTATVSRALMNPEKVSVSTRKRVEAAVLEAGYSPNTLARNLRRNESKTIITIVPDICDPYFAEIIRG
IEDAAVENDYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDHPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLAQLGHKRIAQISGPISATLCKFRQQGYQQALRRAGVSMNPAYSTVGDFTFEAGAQAVRQLLALPEQPTA
IFCHNDAMAIGAIQEAKKLGLRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLDLLKGNDVQAGSRLLE
AKLVVRGSTAPPRI

Nucleotide

• Length: 1005 bp

>NTDB_id=1054356 BCV20_RS00785 WP_010435348.1 169712..170716(-) (cytR) [Vibrio cyclitrophicus strain 10N.286.54.F4]
ATGGCGACAATGAAGGATGTTGCCCAGCTAGCAGGCGTCTCAACAGCAACGGTATCACGTGCATTGATGAACCCTGAAAA
AGTCTCTGTTTCTACTCGTAAGCGAGTCGAAGCGGCAGTGCTAGAAGCTGGATACTCACCCAACACATTAGCTAGAAACT
TACGTCGCAACGAATCAAAAACCATCATCACTATCGTTCCTGATATCTGTGACCCTTATTTTGCTGAAATCATTCGTGGT
ATCGAAGACGCCGCAGTAGAAAATGATTACCTTGTTCTACTGGGTGATAGCGGCCAGCAAAAGAAGCGCGAGTCTTCTTT
TGTTAACTTGGTTTTCACCAAGCAAGCTGACGGTATGCTGCTGCTTGGCACTGACCATCCGTTTGATGTCAGCAAGCCTG
AACAAAAGAATTTACCGCCGATGGTGATGGCATGTGAATTCGCCCCTGAGCTCGAATTACCGACAGTACACATCGATAAC
TTAACCTCTGCATTTGAAGCGGTTAACTACCTAGCCCAATTAGGTCATAAGCGTATCGCTCAAATATCTGGCCCAATATC
AGCGACACTGTGTAAATTCCGCCAACAAGGCTACCAACAAGCATTGCGCCGTGCGGGTGTATCAATGAACCCAGCTTATA
GCACGGTCGGTGACTTTACCTTTGAAGCTGGTGCTCAAGCGGTTCGTCAACTTCTAGCTCTGCCCGAGCAACCTACTGCT
ATTTTCTGTCATAACGATGCAATGGCGATTGGTGCGATTCAAGAAGCGAAGAAGCTAGGTTTACGCGTCCCTCAAGATTT
ATCAATTGTTGGCTTTGATGACATCCAATTCGCTCAATACTGCGATCCACCACTGACAACAATTTCTCAGCCTCGTTACG
AGATTGGACGTCAAGCCATGCTAATGATGCTTGATCTCCTTAAAGGTAACGATGTTCAAGCTGGTTCACGTCTGCTTGAA
GCTAAACTCGTGGTTCGAGGCAGTACTGCACCACCGCGAATTTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-329)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	89.759	99.401	0.892
cytR	Vibrio parahaemolyticus RIMD 2210633	87.688	99.701	0.874