Detailed information NTG1054329

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: BCV24_RS02485
• Genome accession: NZ_CP170005
• Coordinates: 501529..504918 (-)
• Length: 1129 a.a.
• NCBI ID: WP_010436052.1
• Uniprot ID: A0A7Z1MHN7
• Organism: Vibrio cyclitrophicus strain 10N.286.54.F9
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 496529..509918

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BCV24_RS02470 (BCV24_02470)	-	496954..497979 (-)	1026	WP_009847563.1	ABC transporter permease	-
BCV24_RS02475 (BCV24_02475)	-	497982..498968 (-)	987	WP_010436046.1	ABC transporter permease	-
BCV24_RS02480 (BCV24_02480)	-	499138..500820 (-)	1683	WP_016768984.1	ABC transporter substrate-binding protein	-
BCV24_RS02485 (BCV24_02485)	chiS	501529..504918 (-)	3390	WP_010436052.1	response regulator	Regulator
BCV24_RS02490 (BCV24_02490)	rsmC	505135..506157 (-)	1023	WP_010436055.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
BCV24_RS02495 (BCV24_02495)	-	506268..507353 (-)	1086	WP_009847558.1	AI-2E family transporter	-
BCV24_RS02500 (BCV24_02500)	hemL	507696..508991 (-)	1296	WP_010436060.1	glutamate-1-semialdehyde 2,1-aminomutase	-
BCV24_RS02505 (BCV24_02505)	erpA	509288..509629 (+)	342	WP_004734539.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127316.98 Da
• Isoelectric Point: 5.3694

>NTDB_id=1054329 BCV24_RS02485 WP_010436052.1 501529..504918(-) (chiS) [Vibrio cyclitrophicus strain 10N.286.54.F9]
MFRFYRKQKFKRLQNTLMLAFLVLSITPVTLIAIFFLQSHSQDLQEQSTSHLVSVRDTKQQQIVDYLQAQESQVMGFVRS
ELANASGGRFYGLINAFQRLGLDIDEARSNAQQRYIQGSGDQIKTSILPESSSFIGSERYRLLHKRYHNAYLELLKRSDF
DDILLVDINGNVAYSVFKNDDYGTNLLTGKYKDSNLGVTFQRLAKDVKDKRKSNEDYTPVIVSDFKDEDGKQTAWLGAPI
VQQGYLHSYAMFRLPINGITKLIADLNKRSNIQTLLVGDDHLPRSLAHSQESINLSLDVVDKALAGETAVGTFDNTQDQA
IIAAYTPIDLKYATWALVVELPEKEAFARIHQLEKIFVIVMLTAIILVFVASHYLSNFITSPLLKLTWAAEKVSAGDLDE
TMINTERKDEIGRLAISFERMQRSIREKMQLIKSQNDELEDNLKTIQKQNEELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPIPANQKYQLDIIINSGQRLATLVDDLLDYHKMRYGSLDIKKSAVDLSAATSLVLELSHHLLGNKPIRI
INQVPSDLGLVSSDPQRLEQVMYNLVGNAIKYTSEGKIVISASVIDDNIRVQVVDTGQGIPAEYLEHIFEPLIQAGQDSS
NYRQGAGLGLSISRQLIELMGGSLYVSSQPMLGTTFSFTLPLATQQELDSYNESGSYSHFQAPDLIDNSQQENSVINEDP
NGPLLVIADDEPVNLRVLDSFLKLEGYRVRTACDGPETIELIEKEKPELLLLDIMMPGMSGYQVCEALRKRYDHAQLPII
MLTALNQAEDRVRGFEAGANDYLSKPFNKQELAARITAHLSASKAEQRRLENDQLQLELKHRAMVEANLLETQGRLLEQL
ESAPEAIICIRDDQRIRFANEAAAKLFRRGQEQLKRSMADEIIAPKYLKVEQAHYCGDIDIYIDDTRQRIPSDILKLPEG
SGLDTMYIFNVGGGVNSNRVNNLETAVEALSSYAFEGDKDKLQQLKELGGEFTRLADKASGEGKNKQELMREVLVDVMTN
AIIYWESVTGETKFAFAEKSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSIEFILEHCKEQTPERTHIEMLR
DKLQKLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=1054329 BCV24_RS02485 WP_010436052.1 501529..504918(-) (chiS) [Vibrio cyclitrophicus strain 10N.286.54.F9]
ATGTTTAGATTCTATCGTAAGCAGAAGTTTAAGCGCCTTCAAAATACCCTAATGTTGGCATTTCTTGTCCTCAGTATTAC
ACCAGTGACACTTATCGCGATATTTTTCCTCCAATCGCACAGTCAGGATCTTCAGGAACAAAGCACCTCACACCTTGTTT
CGGTTCGTGATACTAAGCAGCAGCAAATTGTCGATTACCTGCAAGCTCAAGAATCCCAAGTCATGGGCTTTGTTCGCTCA
GAATTGGCCAATGCCAGTGGCGGACGCTTTTATGGTTTGATTAACGCCTTCCAGCGTCTCGGTTTAGATATTGACGAGGC
ACGTAGCAATGCTCAGCAACGCTACATCCAAGGCTCCGGCGATCAAATTAAAACATCGATTCTTCCAGAATCCAGCAGCT
TTATAGGCAGTGAACGTTATCGTCTGCTGCACAAGCGCTACCATAACGCTTACCTAGAGCTGCTTAAACGCTCCGATTTT
GACGATATCTTATTGGTTGATATTAACGGCAATGTGGCTTATTCGGTCTTTAAAAATGACGATTACGGCACCAATTTGCT
GACTGGAAAATACAAAGATTCAAATCTCGGTGTTACCTTTCAACGCTTAGCAAAAGACGTCAAAGACAAACGAAAATCCA
ACGAAGATTACACGCCCGTTATTGTTTCCGACTTTAAAGACGAAGACGGAAAACAAACCGCATGGTTAGGTGCGCCTATC
GTACAACAGGGCTATCTACACAGTTATGCGATGTTTAGACTACCGATTAACGGCATTACTAAGCTGATCGCCGATTTAAA
TAAGCGCTCAAATATTCAAACCCTTTTGGTTGGTGACGATCACTTGCCTCGCAGCCTTGCGCACTCTCAAGAGTCGATTA
ATTTGAGTTTGGATGTTGTCGATAAGGCACTTGCCGGTGAAACAGCCGTTGGGACGTTTGATAACACTCAAGATCAAGCG
ATCATCGCAGCCTACACTCCTATTGATCTTAAATACGCAACATGGGCTTTGGTCGTGGAACTTCCAGAAAAAGAAGCCTT
TGCTCGTATTCATCAGCTAGAAAAGATCTTCGTGATCGTTATGCTAACAGCGATCATTCTTGTATTTGTCGCATCGCATT
ATCTGTCTAACTTTATCACTTCCCCACTACTTAAACTGACGTGGGCTGCCGAGAAAGTCTCGGCGGGAGATCTTGATGAA
ACCATGATCAATACAGAACGCAAAGATGAAATAGGTCGCTTGGCGATTAGTTTCGAAAGAATGCAGCGATCGATTCGTGA
AAAGATGCAGCTGATCAAGAGCCAAAATGATGAACTAGAAGACAACCTTAAGACCATTCAAAAGCAAAACGAAGAGTTGC
AACTGGCCAATAAACTGAAAGATGAGTTCTTAGCCACCACCTCACATGAATTGAGAACGCCATTGCATGGCATGGTTGGT
ATTGCTGAAGCGCTGATATCTGGTGCGAATGGTCCTATCCCTGCCAACCAGAAATACCAACTGGATATCATCATCAATAG
TGGTCAGAGATTGGCAACATTGGTTGATGATCTGCTCGATTATCACAAAATGCGTTATGGCAGCTTGGACATTAAAAAGT
CAGCGGTTGATTTGTCTGCTGCCACCAGCCTAGTGCTTGAGTTATCTCATCATCTATTAGGTAACAAGCCAATCCGCATT
ATCAACCAAGTTCCAAGTGATTTAGGGCTCGTTTCATCCGATCCTCAACGACTTGAGCAAGTCATGTATAACTTGGTTGG
CAATGCTATCAAGTACACATCCGAAGGCAAGATTGTTATCTCAGCAAGCGTTATCGACGACAACATTCGTGTACAAGTTG
TCGATACAGGTCAAGGTATCCCAGCAGAATACCTTGAACACATCTTTGAACCACTGATTCAAGCAGGCCAAGATTCAAGT
AACTATCGCCAAGGTGCAGGGCTTGGGTTATCCATTAGCCGTCAGCTCATTGAACTAATGGGCGGCTCGTTGTACGTGAG
TAGTCAACCAATGCTTGGGACAACCTTCAGCTTCACATTACCTCTAGCTACCCAACAAGAATTGGATAGTTACAATGAAT
CAGGGAGCTACTCACACTTCCAAGCCCCAGATTTAATTGATAACTCTCAGCAAGAAAACAGTGTTATCAACGAAGACCCT
AATGGTCCGTTGTTAGTGATTGCTGACGATGAGCCAGTCAACCTGCGCGTGCTAGACAGCTTCTTAAAATTGGAAGGTTA
CCGAGTTCGTACCGCATGTGACGGCCCTGAAACCATTGAACTGATTGAGAAAGAGAAACCAGAGCTACTTCTGCTCGATA
TCATGATGCCAGGTATGAGCGGCTATCAGGTTTGTGAAGCACTTCGTAAGCGATACGATCATGCACAGTTACCAATCATC
ATGCTAACGGCACTCAACCAAGCAGAAGACCGTGTTCGAGGTTTCGAAGCAGGTGCCAATGACTATTTATCTAAACCGTT
CAACAAACAAGAACTGGCCGCTCGAATTACAGCGCATCTATCAGCAAGTAAAGCCGAACAGAGACGCCTTGAAAACGACC
AACTGCAACTGGAACTCAAGCATAGAGCTATGGTTGAAGCTAACCTGTTGGAAACTCAAGGTCGACTGCTAGAACAACTA
GAATCAGCCCCTGAAGCCATTATATGTATTCGTGATGACCAACGTATTCGCTTCGCCAACGAAGCGGCAGCGAAACTATT
TAGACGTGGGCAAGAACAACTCAAGCGTTCAATGGCCGACGAGATAATCGCGCCTAAATATCTTAAAGTGGAACAAGCCC
ATTACTGTGGTGATATTGATATCTACATAGATGACACACGTCAGCGCATACCAAGTGATATCCTTAAGCTACCTGAAGGC
TCAGGGCTCGACACAATGTATATCTTTAATGTGGGTGGTGGTGTTAACTCAAACCGAGTTAATAATCTTGAAACCGCGGT
TGAAGCACTTTCAAGCTACGCCTTTGAAGGTGACAAAGATAAACTACAACAGCTCAAGGAACTTGGCGGTGAGTTTACTC
GCCTTGCTGATAAAGCGAGCGGTGAAGGTAAAAACAAACAAGAACTGATGCGTGAAGTACTAGTCGATGTCATGACTAAT
GCCATCATCTACTGGGAGTCTGTTACTGGTGAAACCAAGTTTGCCTTCGCAGAGAAAAGTGGGTTGTGGCGCGTCTATTT
AGACCGCAGCACCCTGCAAACTCGAACGCTAGACAAATACCTACGCGTCGAAACCCTACCGAAAACGCCTCGCTGGCGAA
CGGTACTAAGCTCAATCGAATTCATACTTGAGCACTGTAAAGAACAAACACCAGAAAGAACTCATATTGAGATGCTAAGG
GATAAACTACAGAAACTACTGACTAGTTAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• Response regulator receiver domain (Response_reg) (726-836)

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• PAS domain (PAS_8) (880-914)

3D structure

• AlphaFold DB: A0A7Z1MHN7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.262	100	0.763