Detailed information NTG1054311

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BCV24_RS00785
• Genome accession: NZ_CP170005
• Coordinates: 169694..170698 (-)
• Length: 334 a.a.
• NCBI ID: WP_010435348.1
• Uniprot ID: A0AAN0LNA0
• Organism: Vibrio cyclitrophicus strain 10N.286.54.F9
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 164694..175698

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BCV24_RS00755 (BCV24_00755)	zapB	164864..165106 (+)	243	WP_010435362.1	cell division protein ZapB	-
BCV24_RS00760 (BCV24_00760)	rraA	165213..165731 (-)	519	WP_010435359.1	ribonuclease E activity regulator RraA	-
BCV24_RS00765 (BCV24_00765)	-	165805..166722 (-)	918	WP_010435357.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BCV24_RS00770 (BCV24_00770)	hslU	166878..168218 (-)	1341	WP_016767976.1	HslU--HslV peptidase ATPase subunit	-
BCV24_RS00775 (BCV24_00775)	hslV	168277..168825 (-)	549	WP_004729692.1	ATP-dependent protease subunit HslV	-
BCV24_RS00780 (BCV24_00780)	-	169032..169571 (-)	540	WP_010435351.1	SPOR domain-containing protein	-
BCV24_RS00785 (BCV24_00785)	cytR	169694..170698 (-)	1005	WP_010435348.1	DNA-binding transcriptional regulator CytR	Regulator
BCV24_RS00790 (BCV24_00790)	priA	170939..173140 (-)	2202	WP_016767977.1	primosomal protein N'	-
BCV24_RS00795 (BCV24_00795)	rpmE	173472..173690 (+)	219	WP_004737142.1	50S ribosomal protein L31	-
BCV24_RS00800 (BCV24_00800)	-	174022..175311 (+)	1290	WP_016787689.1	malic enzyme-like NAD(P)-binding protein	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36507.05 Da
• Isoelectric Point: 6.4911

>NTDB_id=1054311 BCV24_RS00785 WP_010435348.1 169694..170698(-) (cytR) [Vibrio cyclitrophicus strain 10N.286.54.F9]
MATMKDVAQLAGVSTATVSRALMNPEKVSVSTRKRVEAAVLEAGYSPNTLARNLRRNESKTIITIVPDICDPYFAEIIRG
IEDAAVENDYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDHPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLAQLGHKRIAQISGPISATLCKFRQQGYQQALRRAGVSMNPAYSTVGDFTFEAGAQAVRQLLALPEQPTA
IFCHNDAMAIGAIQEAKKLGLRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLDLLKGNDVQAGSRLLE
AKLVVRGSTAPPRI

Nucleotide

• Length: 1005 bp

>NTDB_id=1054311 BCV24_RS00785 WP_010435348.1 169694..170698(-) (cytR) [Vibrio cyclitrophicus strain 10N.286.54.F9]
ATGGCGACAATGAAGGATGTTGCCCAGCTAGCAGGCGTCTCAACAGCAACGGTATCACGTGCATTGATGAACCCTGAAAA
AGTCTCTGTTTCTACTCGTAAGCGAGTCGAAGCGGCAGTGCTAGAAGCTGGATACTCACCCAACACATTAGCTAGAAACT
TACGTCGCAACGAATCAAAAACCATCATCACTATCGTTCCTGATATCTGTGACCCTTATTTTGCTGAAATCATTCGTGGT
ATCGAAGACGCCGCAGTAGAAAATGATTACCTTGTTCTACTGGGTGATAGCGGCCAGCAAAAGAAGCGCGAGTCTTCTTT
TGTTAACTTGGTTTTCACCAAGCAAGCTGACGGTATGCTGCTGCTTGGCACTGACCATCCGTTTGATGTCAGCAAGCCTG
AACAAAAGAATTTACCGCCGATGGTGATGGCATGTGAATTCGCCCCTGAGCTCGAATTACCGACAGTACACATCGATAAC
TTAACCTCTGCATTTGAAGCGGTTAACTACCTAGCCCAATTAGGTCATAAGCGTATCGCTCAAATATCTGGCCCAATATC
AGCGACACTGTGTAAATTCCGCCAACAAGGCTACCAACAAGCATTGCGCCGTGCGGGTGTATCAATGAACCCAGCTTATA
GCACGGTCGGTGACTTTACCTTTGAAGCTGGTGCTCAAGCGGTTCGTCAACTTCTAGCTCTGCCCGAGCAACCTACTGCT
ATTTTCTGTCATAACGATGCAATGGCGATTGGTGCGATTCAAGAAGCGAAGAAGCTAGGTTTACGCGTCCCTCAAGATTT
ATCAATTGTTGGCTTTGATGACATCCAATTCGCTCAATACTGCGATCCACCACTGACAACAATTTCTCAGCCTCGTTACG
AGATTGGACGTCAAGCCATGCTAATGATGCTTGATCTCCTTAAAGGTAACGATGTTCAAGCTGGTTCACGTCTGCTTGAA
GCTAAACTCGTGGTTCGAGGCAGTACTGCACCACCGCGAATTTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-329)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	89.759	99.401	0.892
cytR	Vibrio parahaemolyticus RIMD 2210633	87.688	99.701	0.874