Detailed information NTG1054292

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BCV29_RS08965
• Genome accession: NZ_CP170001
• Coordinates: 2007326..2008330 (+)
• Length: 334 a.a.
• NCBI ID: WP_010435348.1
• Uniprot ID: A0AAN0LNA0
• Organism: Vibrio cyclitrophicus strain 10N.286.55.B4
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2002326..2013330

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BCV29_RS08950 (BCV29_08950)	-	2002713..2004002 (-)	1290	WP_016783694.1	malic enzyme-like NAD(P)-binding protein	-
BCV29_RS08955 (BCV29_08955)	rpmE	2004334..2004552 (-)	219	WP_004737142.1	50S ribosomal protein L31	-
BCV29_RS08960 (BCV29_08960)	priA	2004884..2007085 (+)	2202	WP_102312938.1	primosomal protein N'	-
BCV29_RS08965 (BCV29_08965)	cytR	2007326..2008330 (+)	1005	WP_010435348.1	DNA-binding transcriptional regulator CytR	Regulator
BCV29_RS08970 (BCV29_08970)	-	2008453..2008992 (+)	540	WP_010435351.1	SPOR domain-containing protein	-
BCV29_RS08975 (BCV29_08975)	hslV	2009199..2009747 (+)	549	WP_004729692.1	ATP-dependent protease subunit HslV	-
BCV29_RS08980 (BCV29_08980)	hslU	2009806..2011146 (+)	1341	WP_016767976.1	HslU--HslV peptidase ATPase subunit	-
BCV29_RS08985 (BCV29_08985)	-	2011302..2012219 (+)	918	WP_010435357.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BCV29_RS08990 (BCV29_08990)	rraA	2012293..2012811 (+)	519	WP_010435359.1	ribonuclease E activity regulator RraA	-
BCV29_RS08995 (BCV29_08995)	zapB	2012918..2013160 (-)	243	WP_010435362.1	cell division protein ZapB	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36507.05 Da
• Isoelectric Point: 6.4911

>NTDB_id=1054292 BCV29_RS08965 WP_010435348.1 2007326..2008330(+) (cytR) [Vibrio cyclitrophicus strain 10N.286.55.B4]
MATMKDVAQLAGVSTATVSRALMNPEKVSVSTRKRVEAAVLEAGYSPNTLARNLRRNESKTIITIVPDICDPYFAEIIRG
IEDAAVENDYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDHPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLAQLGHKRIAQISGPISATLCKFRQQGYQQALRRAGVSMNPAYSTVGDFTFEAGAQAVRQLLALPEQPTA
IFCHNDAMAIGAIQEAKKLGLRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLDLLKGNDVQAGSRLLE
AKLVVRGSTAPPRI

Nucleotide

• Length: 1005 bp

>NTDB_id=1054292 BCV29_RS08965 WP_010435348.1 2007326..2008330(+) (cytR) [Vibrio cyclitrophicus strain 10N.286.55.B4]
ATGGCGACAATGAAGGATGTTGCCCAGCTAGCAGGCGTCTCAACAGCAACGGTATCACGTGCATTGATGAACCCTGAAAA
AGTCTCTGTTTCTACTCGTAAGCGAGTCGAAGCGGCAGTGCTAGAAGCTGGATACTCACCCAACACATTAGCTAGAAACT
TACGTCGCAACGAATCAAAAACCATCATCACTATCGTTCCTGATATCTGTGACCCTTATTTTGCTGAAATCATTCGTGGT
ATCGAAGACGCCGCAGTAGAAAATGATTACCTTGTTCTACTGGGTGATAGCGGCCAGCAAAAGAAGCGCGAGTCTTCTTT
TGTTAACTTGGTTTTCACCAAGCAAGCTGACGGTATGCTGCTGCTTGGCACTGACCATCCGTTTGATGTCAGCAAGCCTG
AACAAAAGAATTTACCGCCGATGGTGATGGCATGTGAATTCGCCCCTGAGCTTGAATTACCGACAGTACACATCGATAAC
TTAACCTCTGCATTTGAAGCGGTTAACTACCTAGCCCAATTAGGTCATAAGCGTATCGCTCAAATATCTGGCCCAATATC
AGCGACACTGTGTAAATTCCGCCAACAAGGCTACCAACAAGCATTGCGCCGTGCGGGTGTATCAATGAACCCAGCTTATA
GCACGGTCGGTGACTTTACCTTTGAAGCTGGTGCTCAAGCGGTTCGTCAACTTCTAGCTCTGCCCGAGCAACCTACTGCT
ATTTTCTGTCATAACGATGCAATGGCGATTGGTGCGATTCAAGAAGCGAAGAAGCTAGGTTTACGCGTCCCTCAAGATTT
ATCAATTGTTGGCTTTGATGACATCCAATTCGCTCAATACTGCGATCCACCACTGACAACAATTTCTCAGCCTCGTTACG
AGATTGGACGTCAAGCCATGCTAATGATGCTTGATCTCCTTAAAGGTAACGATGTTCAAGCTGGTTCACGTCTGCTTGAA
GCTAAACTCGTGGTTCGAGGCAGTACTGCACCACCGCGAATTTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-329)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	89.759	99.401	0.892
cytR	Vibrio parahaemolyticus RIMD 2210633	87.688	99.701	0.874