Detailed information NTG1054274

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: BCV29_RS07265
• Genome accession: NZ_CP170001
• Coordinates: 1673031..1676420 (+)
• Length: 1129 a.a.
• NCBI ID: WP_102312954.1
• Uniprot ID: -
• Organism: Vibrio cyclitrophicus strain 10N.286.55.B4
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1668031..1681420

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BCV29_RS07245 (BCV29_07245)	erpA	1668320..1668661 (-)	342	WP_004734539.1	iron-sulfur cluster insertion protein ErpA	-
BCV29_RS07250 (BCV29_07250)	hemL	1668958..1670253 (+)	1296	WP_010436060.1	glutamate-1-semialdehyde 2,1-aminomutase	-
BCV29_RS07255 (BCV29_07255)	-	1670596..1671681 (+)	1086	WP_009847558.1	AI-2E family transporter	-
BCV29_RS07260 (BCV29_07260)	rsmC	1671792..1672814 (+)	1023	WP_010436055.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
BCV29_RS07265 (BCV29_07265)	chiS	1673031..1676420 (+)	3390	WP_102312954.1	response regulator	Regulator
BCV29_RS07270 (BCV29_07270)	-	1677129..1678811 (+)	1683	WP_016768984.1	ABC transporter substrate-binding protein	-
BCV29_RS07275 (BCV29_07275)	-	1678981..1679967 (+)	987	WP_412495361.1	ABC transporter permease	-
BCV29_RS07280 (BCV29_07280)	-	1679970..1680995 (+)	1026	WP_009847563.1	ABC transporter permease	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127302.95 Da
• Isoelectric Point: 5.3694

>NTDB_id=1054274 BCV29_RS07265 WP_102312954.1 1673031..1676420(+) (chiS) [Vibrio cyclitrophicus strain 10N.286.55.B4]
MFRFYRKQKFKRLQNTLMLAFLVLSITPVTLIAIFFLQSHSQDLQEQSTSHLVSVRDTKQQQIVDYLQAQESQVMGFVRS
ELANASGGRFYGLINAFQRLGLDIDEARSNAQQRYIQGSGDQIKTSILPESSSFIGSERYRLLHKRYHNAYLELLKRSDF
DDILLVDINGNVAYSVFKNDDYGTNLLTGKYKDSNLGVTFQRLAKDVKDKRKSNEDYTPVIVSDFKEEDGKQTAWLGAPI
VQQGYLHSYAMFRLPINGITKLIADLNKRSNIQTLLVGDDHLPRSLAHSQESINLSLDVVDKALAGETAVGTFDNTQDQA
IIAAYTPIDLKYATWALVVELPEKEAFARIHQLEKIFVIVMLTAIILVFVASHYLSNFITSPLLKLTWAAEKVSAGDLDE
TMINTERKDEIGRLAVSFERMQRSIRDKMQLIKSQNDELEDNLKTIQKQNEELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPIPASQKYQLDIIINSGQRLATLVDDLLDYHKMRYGSLDIKKSAVDLSAATSLVLELSHHLLGNKPIRI
INQVPSDLGLVSSDPQRLEQVMYNLVGNAIKYTSEGKIVISASVIDDNIRVQVVDTGQGIPAEYLEHIFEPLIQAGQDSS
NYRQGAGLGLSISRQLIELMGGSLYVSSQPMLGTTFSFTLPLATQQELDSYNESGSYSHFQAPDLIDNSQQENSVINEDP
NGPLLVIADDEPVNLRVLDSFLKLEGYRVRTACDGPETIELIEKEKPELLLLDIMMPGMSGYQVCEALRKRYDHAQLPII
MLTALNQAEDRVRGFEAGANDYLSKPFNKQELAARITAHLSASKAEQRRLENDQLQLELKHRAMVEANLLETQGRLLEQL
ESAPEAIICIRDDQRIRFANEAAAKLFRRGQEQLKRSMADEIIAPKYLKVEQAHYCGDIDIYIDDTRQRIPSDILKLPEG
SGLDTMYIFNVGGGVNSNRVNNLETAVEALSSYAFEGDKDKLQQLKELGGEFTRLADKASGEGKNKQELMREVLVDVMTN
AIIYWESVTGETKFAFAEKSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLNSIEFILEHCKEQTPERTHIEMLR
DKLQKLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=1054274 BCV29_RS07265 WP_102312954.1 1673031..1676420(+) (chiS) [Vibrio cyclitrophicus strain 10N.286.55.B4]
ATGTTTAGATTCTATCGTAAGCAGAAGTTTAAGCGCCTTCAAAATACCCTAATGTTGGCATTTCTTGTCCTCAGTATTAC
ACCAGTGACACTTATCGCGATATTTTTCCTCCAATCGCACAGTCAGGATCTTCAGGAACAAAGCACCTCACACCTTGTTT
CGGTTCGTGATACTAAGCAGCAGCAAATTGTCGATTACCTGCAAGCTCAAGAATCCCAAGTCATGGGCTTTGTTCGCTCA
GAATTGGCCAATGCCAGTGGCGGACGCTTTTATGGTTTGATCAACGCCTTCCAGCGTCTCGGTTTAGATATTGACGAGGC
ACGTAGCAATGCTCAGCAACGCTACATCCAAGGCTCCGGCGATCAAATTAAAACATCGATTCTTCCAGAATCCAGCAGCT
TTATAGGCAGTGAACGTTATCGTCTGCTGCACAAGCGCTACCATAACGCTTACCTAGAGCTGCTTAAACGCTCCGATTTT
GACGATATCTTATTGGTTGATATTAACGGCAATGTGGCTTATTCGGTGTTTAAAAATGACGATTACGGCACCAATTTGCT
GACTGGAAAATACAAAGATTCAAATCTCGGTGTTACCTTTCAACGCTTAGCAAAAGACGTAAAAGACAAACGTAAATCCA
ACGAAGATTACACGCCCGTTATTGTTTCCGACTTTAAAGAAGAAGACGGAAAACAAACCGCATGGTTAGGTGCGCCTATC
GTACAACAGGGCTATCTACACAGTTATGCGATGTTTAGACTACCGATTAACGGCATTACTAAGCTGATCGCCGATTTAAA
TAAGCGCTCAAATATTCAAACCCTTTTGGTTGGTGACGATCACTTGCCTCGCAGCCTTGCGCACTCACAAGAGTCGATTA
ATTTGAGTTTGGATGTTGTCGATAAGGCACTTGCCGGTGAAACAGCCGTTGGGACGTTTGATAACACTCAAGATCAAGCG
ATCATCGCAGCCTACACTCCTATTGATCTTAAATACGCAACATGGGCTTTGGTCGTGGAACTTCCAGAAAAAGAAGCCTT
TGCTCGTATTCATCAGCTAGAAAAGATCTTCGTGATCGTTATGCTAACAGCGATCATTCTTGTATTTGTCGCATCGCATT
ATCTGTCTAACTTTATCACTTCCCCACTACTTAAACTGACGTGGGCTGCCGAGAAAGTCTCGGCGGGAGATCTTGATGAA
ACCATGATCAATACCGAACGCAAAGATGAAATAGGTCGCTTGGCGGTGAGTTTCGAAAGAATGCAGCGATCGATTCGTGA
CAAAATGCAGCTGATCAAGAGCCAAAACGATGAACTAGAGGACAACCTTAAGACCATTCAAAAGCAAAACGAAGAGTTGC
AACTGGCCAATAAACTGAAAGATGAGTTCTTAGCCACCACCTCACATGAATTGAGAACGCCATTGCATGGCATGGTTGGT
ATTGCTGAAGCGCTGATATCTGGTGCCAACGGCCCTATTCCTGCCAGCCAGAAATACCAACTGGATATCATCATCAATAG
TGGTCAGAGATTGGCAACATTGGTTGATGATCTTCTCGATTATCACAAAATGCGTTATGGCAGCTTGGACATTAAAAAGT
CAGCGGTTGACCTGTCGGCTGCCACCAGCTTGGTACTTGAGTTATCTCATCACCTGTTAGGTAACAAACCAATCCGTATC
ATTAACCAAGTGCCGAGTGATTTAGGGCTCGTTTCATCCGATCCTCAACGACTTGAGCAAGTCATGTATAACTTGGTTGG
CAATGCTATCAAGTACACATCCGAAGGCAAGATTGTTATCTCAGCAAGCGTTATCGACGACAACATTCGTGTACAAGTTG
TCGATACAGGTCAAGGTATCCCAGCAGAATACCTTGAACACATCTTTGAACCACTGATTCAAGCAGGCCAAGATTCAAGT
AACTATCGCCAAGGTGCAGGGCTTGGGTTATCCATTAGCCGTCAGCTCATTGAACTAATGGGCGGCTCGTTGTACGTGAG
TAGTCAACCAATGCTTGGGACAACCTTCAGCTTCACATTACCTCTAGCTACCCAACAAGAATTGGATAGTTACAATGAAT
CAGGGAGCTACTCACACTTCCAAGCCCCAGATTTAATTGATAACTCTCAGCAAGAAAACAGTGTTATCAACGAAGACCCT
AATGGTCCGTTGTTAGTGATTGCTGACGATGAGCCAGTCAACCTGCGCGTGCTAGACAGCTTCTTAAAATTGGAAGGTTA
CCGAGTTCGTACCGCATGTGACGGCCCTGAAACCATTGAACTGATTGAGAAAGAGAAACCAGAGCTACTTCTGCTCGATA
TCATGATGCCAGGTATGAGCGGCTATCAGGTTTGTGAAGCACTTCGTAAGCGATACGATCATGCACAGTTACCAATCATC
ATGCTAACGGCACTCAACCAAGCAGAAGACCGTGTTCGAGGTTTCGAAGCAGGTGCCAATGACTATTTATCTAAACCGTT
CAACAAACAAGAACTGGCCGCTCGAATTACAGCGCATCTATCAGCAAGTAAAGCCGAACAGAGACGCCTTGAAAACGACC
AACTGCAACTGGAACTCAAGCATAGAGCTATGGTTGAAGCTAACCTGTTGGAAACTCAAGGTCGACTGCTAGAACAACTA
GAATCAGCCCCTGAAGCCATTATATGTATTCGTGATGACCAACGTATTCGCTTCGCCAACGAAGCGGCAGCGAAACTATT
TAGACGTGGGCAAGAACAACTCAAGCGTTCAATGGCCGACGAGATAATCGCGCCTAAATATCTTAAAGTGGAACAAGCCC
ATTACTGTGGTGATATTGATATCTACATAGATGACACACGTCAGCGCATACCAAGTGATATCCTTAAGCTACCTGAAGGC
TCAGGGCTCGACACAATGTATATCTTTAATGTGGGTGGTGGTGTTAACTCAAACCGAGTTAATAATCTTGAAACCGCGGT
TGAAGCACTTTCAAGCTACGCCTTTGAAGGTGACAAAGATAAACTACAACAGCTCAAGGAACTTGGCGGTGAGTTTACTC
GCCTTGCTGATAAAGCGAGCGGTGAAGGTAAAAACAAACAAGAACTGATGCGTGAAGTACTAGTCGATGTCATGACTAAT
GCCATCATCTACTGGGAGTCTGTTACTGGTGAAACCAAGTTTGCCTTCGCAGAGAAAAGTGGGTTGTGGCGCGTCTATTT
AGACCGCAGCACCCTGCAAACTCGAACGCTAGACAAATACCTACGCGTCGAAACCCTACCGAAAACGCCTCGCTGGCGAA
CGGTACTAAACTCAATCGAATTCATACTTGAGCACTGTAAAGAACAAACACCAGAAAGAACTCATATTGAGATGCTAAGG
GATAAACTACAGAAACTACTGACTAGTTAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (375-427)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• PAS domain (PAS_8) (880-914)

• Response regulator receiver domain (Response_reg) (726-836)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.351	100	0.764