Detailed information NTG1054247

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BCV31_RS07890
• Genome accession: NZ_CP169999
• Coordinates: 1783674..1784678 (+)
• Length: 334 a.a.
• NCBI ID: WP_010435348.1
• Uniprot ID: A0AAN0LNA0
• Organism: Vibrio cyclitrophicus strain 10N.286.55.C10
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1778674..1789678

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BCV31_RS07875 (BCV31_07875)	-	1779062..1780351 (-)	1290	WP_065100852.1	malic enzyme-like NAD(P)-binding protein	-
BCV31_RS07880 (BCV31_07880)	rpmE	1780683..1780901 (-)	219	WP_407834094.1	50S ribosomal protein L31	-
BCV31_RS07885 (BCV31_07885)	priA	1781232..1783433 (+)	2202	WP_016767977.1	primosomal protein N'	-
BCV31_RS07890 (BCV31_07890)	cytR	1783674..1784678 (+)	1005	WP_010435348.1	DNA-binding transcriptional regulator CytR	Regulator
BCV31_RS07895 (BCV31_07895)	-	1784801..1785340 (+)	540	WP_010435351.1	SPOR domain-containing protein	-
BCV31_RS07900 (BCV31_07900)	hslV	1785547..1786095 (+)	549	WP_004729692.1	ATP-dependent protease subunit HslV	-
BCV31_RS07905 (BCV31_07905)	hslU	1786154..1787494 (+)	1341	WP_016767976.1	HslU--HslV peptidase ATPase subunit	-
BCV31_RS07910 (BCV31_07910)	-	1787650..1788567 (+)	918	WP_010435357.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BCV31_RS07915 (BCV31_07915)	rraA	1788641..1789159 (+)	519	WP_065100853.1	ribonuclease E activity regulator RraA	-
BCV31_RS07920 (BCV31_07920)	zapB	1789266..1789508 (-)	243	WP_010435362.1	cell division protein ZapB	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36507.05 Da
• Isoelectric Point: 6.4911

>NTDB_id=1054247 BCV31_RS07890 WP_010435348.1 1783674..1784678(+) (cytR) [Vibrio cyclitrophicus strain 10N.286.55.C10]
MATMKDVAQLAGVSTATVSRALMNPEKVSVSTRKRVEAAVLEAGYSPNTLARNLRRNESKTIITIVPDICDPYFAEIIRG
IEDAAVENDYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDHPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLAQLGHKRIAQISGPISATLCKFRQQGYQQALRRAGVSMNPAYSTVGDFTFEAGAQAVRQLLALPEQPTA
IFCHNDAMAIGAIQEAKKLGLRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLDLLKGNDVQAGSRLLE
AKLVVRGSTAPPRI

Nucleotide

• Length: 1005 bp

>NTDB_id=1054247 BCV31_RS07890 WP_010435348.1 1783674..1784678(+) (cytR) [Vibrio cyclitrophicus strain 10N.286.55.C10]
ATGGCGACAATGAAGGATGTTGCCCAGCTAGCAGGCGTCTCAACAGCAACGGTATCACGTGCATTGATGAACCCTGAAAA
AGTCTCTGTTTCTACTCGTAAGCGAGTCGAAGCGGCAGTGCTAGAAGCTGGATACTCACCCAACACATTAGCTAGAAACT
TACGTCGCAACGAATCAAAAACCATCATCACTATCGTTCCTGATATCTGTGACCCTTATTTTGCTGAAATCATTCGTGGT
ATCGAAGACGCCGCAGTAGAAAATGATTACCTTGTTCTACTGGGTGATAGCGGCCAGCAAAAGAAGCGCGAGTCTTCTTT
TGTTAACTTGGTTTTCACCAAGCAAGCTGACGGTATGCTGCTGCTTGGCACTGACCATCCGTTTGATGTCAGCAAGCCTG
AACAAAAGAATTTACCGCCGATGGTGATGGCATGTGAATTCGCCCCTGAGCTTGAATTACCGACAGTACACATCGATAAC
TTAACCTCTGCATTTGAAGCGGTTAACTACCTAGCCCAATTAGGTCATAAGCGTATCGCTCAAATATCTGGCCCAATATC
AGCGACACTGTGTAAATTCCGCCAACAAGGCTACCAACAAGCATTGCGCCGTGCGGGTGTATCAATGAACCCAGCTTATA
GCACGGTCGGTGACTTTACCTTTGAAGCTGGTGCTCAAGCGGTTCGTCAACTTCTAGCTCTGCCCGAGCAACCTACTGCT
ATTTTCTGTCATAACGATGCAATGGCGATTGGTGCGATTCAAGAAGCGAAGAAGCTAGGTTTACGCGTCCCTCAAGATTT
ATCAATTGTTGGCTTTGATGACATCCAATTCGCTCAATACTGCGATCCACCACTGACAACAATTTCTCAGCCTCGTTACG
AGATTGGACGTCAAGCCATGCTAATGATGCTTGATCTCCTTAAAGGTAACGATGTTCAAGCTGGTTCACGTCTGCTTGAA
GCTAAACTCGTGGTTCGAGGCAGTACTGCACCACCGCGAATTTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-329)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	89.759	99.401	0.892
cytR	Vibrio parahaemolyticus RIMD 2210633	87.688	99.701	0.874