Detailed information NTG1054209

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BCV36_RS12335
• Genome accession: NZ_CP169997
• Coordinates: 2777569..2778573 (+)
• Length: 334 a.a.
• NCBI ID: WP_010435348.1
• Uniprot ID: A0AAN0LNA0
• Organism: Vibrio cyclitrophicus strain 10N.286.55.C4
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2772569..2783573

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BCV36_RS12320 (BCV36_12320)	-	2772957..2774246 (-)	1290	WP_065100852.1	malic enzyme-like NAD(P)-binding protein	-
BCV36_RS12325 (BCV36_12325)	rpmE	2774578..2774796 (-)	219	WP_004737142.1	50S ribosomal protein L31	-
BCV36_RS12330 (BCV36_12330)	priA	2775127..2777328 (+)	2202	WP_016767977.1	primosomal protein N'	-
BCV36_RS12335 (BCV36_12335)	cytR	2777569..2778573 (+)	1005	WP_010435348.1	DNA-binding transcriptional regulator CytR	Regulator
BCV36_RS12340 (BCV36_12340)	-	2778696..2779235 (+)	540	WP_010435351.1	SPOR domain-containing protein	-
BCV36_RS12345 (BCV36_12345)	hslV	2779442..2779990 (+)	549	WP_004729692.1	ATP-dependent protease subunit HslV	-
BCV36_RS12350 (BCV36_12350)	hslU	2780049..2781389 (+)	1341	WP_016767976.1	HslU--HslV peptidase ATPase subunit	-
BCV36_RS12355 (BCV36_12355)	-	2781545..2782462 (+)	918	WP_010435357.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BCV36_RS12360 (BCV36_12360)	rraA	2782536..2783054 (+)	519	WP_065100853.1	ribonuclease E activity regulator RraA	-
BCV36_RS12365 (BCV36_12365)	zapB	2783161..2783403 (-)	243	WP_010435362.1	cell division protein ZapB	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36507.05 Da
• Isoelectric Point: 6.4911

>NTDB_id=1054209 BCV36_RS12335 WP_010435348.1 2777569..2778573(+) (cytR) [Vibrio cyclitrophicus strain 10N.286.55.C4]
MATMKDVAQLAGVSTATVSRALMNPEKVSVSTRKRVEAAVLEAGYSPNTLARNLRRNESKTIITIVPDICDPYFAEIIRG
IEDAAVENDYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDHPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLAQLGHKRIAQISGPISATLCKFRQQGYQQALRRAGVSMNPAYSTVGDFTFEAGAQAVRQLLALPEQPTA
IFCHNDAMAIGAIQEAKKLGLRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLDLLKGNDVQAGSRLLE
AKLVVRGSTAPPRI

Nucleotide

• Length: 1005 bp

>NTDB_id=1054209 BCV36_RS12335 WP_010435348.1 2777569..2778573(+) (cytR) [Vibrio cyclitrophicus strain 10N.286.55.C4]
ATGGCGACAATGAAGGATGTTGCCCAGCTAGCAGGCGTCTCAACAGCAACGGTATCACGTGCATTGATGAACCCTGAAAA
AGTCTCTGTTTCTACTCGTAAGCGAGTCGAAGCGGCAGTGCTAGAAGCTGGATACTCACCCAACACATTAGCTAGAAACT
TACGTCGCAACGAATCAAAAACCATCATCACTATCGTTCCTGATATCTGTGACCCTTATTTTGCTGAAATCATTCGTGGT
ATCGAAGACGCCGCAGTAGAAAATGATTACCTTGTTCTACTGGGTGATAGCGGCCAGCAAAAGAAGCGCGAGTCTTCTTT
TGTTAACTTGGTTTTCACCAAGCAAGCTGACGGTATGCTGCTGCTTGGCACTGACCATCCGTTTGATGTCAGCAAGCCTG
AACAAAAGAATTTACCGCCGATGGTGATGGCATGTGAATTCGCCCCTGAGCTTGAATTACCGACAGTACACATCGATAAC
TTAACCTCTGCATTTGAAGCGGTTAACTACCTAGCCCAATTAGGTCATAAGCGTATCGCTCAAATATCTGGCCCAATATC
AGCGACACTGTGTAAATTCCGCCAACAAGGCTACCAACAAGCATTGCGCCGTGCGGGTGTATCAATGAACCCAGCTTATA
GCACGGTCGGTGACTTTACCTTTGAAGCTGGTGCTCAAGCGGTTCGTCAACTTCTAGCTCTGCCCGAGCAACCTACTGCT
ATTTTCTGTCATAACGATGCAATGGCGATTGGTGCGATTCAAGAAGCGAAGAAGCTAGGTTTACGCGTCCCTCAAGATTT
ATCAATTGTTGGCTTTGATGACATCCAATTCGCTCAATACTGCGATCCACCACTGACAACAATTTCTCAGCCTCGTTACG
AGATTGGACGTCAAGCCATGCTAATGATGCTTGATCTCCTTAAAGGTAACGATGTTCAAGCTGGTTCACGTCTGCTTGAA
GCTAAACTCGTGGTTCGAGGCAGTACTGCACCACCGCGAATTTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-329)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	89.759	99.401	0.892
cytR	Vibrio parahaemolyticus RIMD 2210633	87.688	99.701	0.874