Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8608_RS06100 | Genome accession | NZ_AP028398 |
| Coordinates | 1154839..1155141 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain BCH-11511 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1149839..1160141
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8608_RS06075 (B11511_12170) | rpsR | 1150202..1150462 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8608_RS06080 (B11511_12180) | lon | 1150522..1152897 (-) | 2376 | WP_002901106.1 | endopeptidase La | - |
| R8608_RS06085 (B11511_12190) | - | 1152914..1153561 (-) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| R8608_RS06090 (B11511_12200) | fliW | 1153722..1154111 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8608_RS06095 (B11511_12210) | proC | 1154111..1154842 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8608_RS06100 (B11511_12220) | ctsT | 1154839..1155141 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| R8608_RS06105 (B11511_12230) | - | 1155138..1155800 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| R8608_RS06110 (B11511_12240) | - | 1155797..1156249 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| R8608_RS06115 (B11511_12250) | hemD | 1156246..1156875 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| R8608_RS06120 (B11511_12260) | thiE | 1156853..1157485 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| R8608_RS06125 (B11511_12270) | thiD | 1157475..1158287 (-) | 813 | WP_002901102.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8608_RS06130 (B11511_12280) | - | 1158284..1158970 (-) | 687 | WP_002901100.1 | endonuclease III domain-containing protein | - |
| R8608_RS06135 (B11511_12290) | - | 1158967..1159728 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=105413 R8608_RS06100 WP_002853046.1 1154839..1155141(+) (ctsT) [Campylobacter jejuni strain BCH-11511]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=105413 R8608_RS06100 WP_002853046.1 1154839..1155141(+) (ctsT) [Campylobacter jejuni strain BCH-11511]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |