Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACNUEC_RS09295 Genome accession   NZ_OZ197083
Coordinates   1828538..1829278 (+) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus isolate 23S01949-1     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1823538..1834278
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNUEC_RS09270 yhaM 1823957..1824898 (+) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -
  ACNUEC_RS09275 - 1825019..1825981 (-) 963 WP_000782119.1 foldase protein PrsA -
  ACNUEC_RS09280 - 1826186..1826743 (-) 558 WP_000477959.1 DUF3267 domain-containing protein -
  ACNUEC_RS09285 - 1827475..1827840 (-) 366 WP_000648118.1 YtxH domain-containing protein -
  ACNUEC_RS09290 - 1827982..1828404 (-) 423 WP_000004984.1 HIT family protein -
  ACNUEC_RS09295 pptA 1828538..1829278 (+) 741 WP_000216874.1 ABC transporter ATP-binding protein EcsA Regulator
  ACNUEC_RS09300 ecsB 1829271..1830494 (+) 1224 WP_001245751.1 ABC transporter permease EcsB -
  ACNUEC_RS09305 traP 1830618..1831121 (-) 504 WP_000737983.1 signal transduction protein TRAP -
  ACNUEC_RS09310 - 1831307..1831393 (+) 87 WP_031875110.1 hypothetical protein -
  ACNUEC_RS09315 hemE 1831383..1832420 (+) 1038 WP_000233540.1 uroporphyrinogen decarboxylase -
  ACNUEC_RS09320 hemH 1832478..1833401 (+) 924 WP_000162876.1 ferrochelatase -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=1053904 ACNUEC_RS09295 WP_000216874.1 1828538..1829278(+) (pptA) [Staphylococcus aureus isolate 23S01949-1]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=1053904 ACNUEC_RS09295 WP_000216874.1 1828538..1829278(+) (pptA) [Staphylococcus aureus isolate 23S01949-1]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATCGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGACATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGTCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCGACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545

Multiple sequence alignment