Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8952_RS05730 | Genome accession | NZ_AP028396 |
| Coordinates | 1113110..1113412 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain BCH-11505 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1108110..1118412
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8952_RS05705 (B11505_11240) | rpsR | 1108473..1108733 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8952_RS05710 (B11505_11250) | lon | 1108793..1111168 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| R8952_RS05715 (B11505_11260) | - | 1111185..1111832 (-) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| R8952_RS05720 (B11505_11270) | fliW | 1111993..1112382 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8952_RS05725 (B11505_11280) | proC | 1112382..1113113 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8952_RS05730 (B11505_11290) | ctsT | 1113110..1113412 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| R8952_RS05735 (B11505_11300) | - | 1113409..1114071 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| R8952_RS05740 (B11505_11310) | - | 1114068..1114520 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| R8952_RS05745 (B11505_11320) | hemD | 1114517..1115146 (-) | 630 | WP_002852819.1 | uroporphyrinogen-III synthase | - |
| R8952_RS05750 (B11505_11330) | thiE | 1115124..1115756 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| R8952_RS05755 (B11505_11340) | thiD | 1115746..1116558 (-) | 813 | WP_002852691.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8952_RS05760 (B11505_11350) | - | 1116555..1117241 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| R8952_RS05765 (B11505_11360) | - | 1117238..1117999 (-) | 762 | WP_317649899.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=105386 R8952_RS05730 WP_002853046.1 1113110..1113412(+) (ctsT) [Campylobacter jejuni strain BCH-11505]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=105386 R8952_RS05730 WP_002853046.1 1113110..1113412(+) (ctsT) [Campylobacter jejuni strain BCH-11505]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |