Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8922_RS05880 | Genome accession | NZ_AP028390 |
| Coordinates | 1132493..1132795 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain BCH-11411 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1127493..1137795
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8922_RS05855 (B11411_11690) | rpsR | 1127855..1128115 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8922_RS05860 (B11411_11700) | lon | 1128176..1130551 (-) | 2376 | WP_107701907.1 | endopeptidase La | - |
| R8922_RS05865 (B11411_11710) | bamD | 1130568..1131215 (-) | 648 | WP_052802090.1 | outer membrane protein assembly factor BamD | - |
| R8922_RS05870 (B11411_11720) | fliW | 1131376..1131765 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8922_RS05875 (B11411_11730) | proC | 1131765..1132496 (+) | 732 | WP_070296720.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8922_RS05880 (B11411_11740) | ctsT | 1132493..1132795 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| R8922_RS05885 (B11411_11750) | - | 1132792..1133454 (+) | 663 | WP_070296719.1 | hypothetical protein | - |
| R8922_RS05890 (B11411_11760) | - | 1133451..1133903 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| R8922_RS05895 (B11411_11770) | hemD | 1133900..1134529 (-) | 630 | WP_002882604.1 | uroporphyrinogen-III synthase | - |
| R8922_RS05900 (B11411_11780) | thiE | 1134507..1135139 (-) | 633 | WP_002882603.1 | thiamine phosphate synthase | - |
| R8922_RS05905 (B11411_11790) | thiD | 1135129..1135941 (-) | 813 | WP_002882602.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8922_RS05910 (B11411_11800) | - | 1135938..1136624 (-) | 687 | WP_070296717.1 | endonuclease III domain-containing protein | - |
| R8922_RS05915 (B11411_11810) | - | 1136621..1137382 (-) | 762 | WP_002882600.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=105331 R8922_RS05880 WP_002855822.1 1132493..1132795(+) (ctsT) [Campylobacter jejuni strain BCH-11411]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=105331 R8922_RS05880 WP_002855822.1 1132493..1132795(+) (ctsT) [Campylobacter jejuni strain BCH-11411]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |