Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ABUS37_RS10570 | Genome accession | NZ_CP169809 |
| Coordinates | 2234489..2234869 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836910.1 | Uniprot ID | A0AAQ1AB09 |
| Organism | Acinetobacter baumannii strain Lv347 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2229489..2239869
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABUS37_RS10540 | tadA | 2229608..2230111 (-) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
| ABUS37_RS10545 | - | 2230118..2231242 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ABUS37_RS10550 | ung | 2231239..2231952 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| ABUS37_RS10555 | - | 2232003..2232599 (-) | 597 | WP_000908451.1 | 6-carboxytetrahydropterin synthase | - |
| ABUS37_RS10560 | gspK | 2232829..2233788 (-) | 960 | WP_000301481.1 | type II secretion system minor pseudopilin GspK | - |
| ABUS37_RS10565 | xcpW | 2233788..2234489 (-) | 702 | WP_000594572.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ABUS37_RS10570 | xcpV | 2234489..2234869 (-) | 381 | WP_000836910.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ABUS37_RS10575 | - | 2234859..2235413 (-) | 555 | WP_000841379.1 | type II secretion system protein | - |
| ABUS37_RS10580 | - | 2235423..2236031 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ABUS37_RS10585 | - | 2236069..2236842 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| ABUS37_RS10590 | - | 2236860..2237201 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ABUS37_RS10595 | - | 2237213..2238193 (-) | 981 | WP_001075418.1 | DNA polymerase III subunit delta' | - |
| ABUS37_RS10600 | kdsB | 2238205..2238966 (-) | 762 | WP_000680701.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13957.17 Da Isoelectric Point: 9.8004
>NTDB_id=1053295 ABUS37_RS10570 WP_000836910.1 2234489..2234869(-) (xcpV) [Acinetobacter baumannii strain Lv347]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHIVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHIVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1053295 ABUS37_RS10570 WP_000836910.1 2234489..2234869(-) (xcpV) [Acinetobacter baumannii strain Lv347]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATAGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATAGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |