Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | ABUS37_RS01625 | Genome accession | NZ_CP169809 |
| Coordinates | 344080..344553 (+) | Length | 157 a.a. |
| NCBI ID | WP_001214065.1 | Uniprot ID | N9K1Q3 |
| Organism | Acinetobacter baumannii strain Lv347 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 339080..349553
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABUS37_RS01600 | - | 339543..341648 (-) | 2106 | WP_001117590.1 | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | - |
| ABUS37_RS01605 | - | 341688..341818 (-) | 131 | Protein_307 | hypothetical protein | - |
| ABUS37_RS01610 | rpoZ | 341857..342135 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| ABUS37_RS01615 | gmk | 342208..342837 (-) | 630 | WP_000015937.1 | guanylate kinase | - |
| ABUS37_RS01620 | ispH | 342960..343910 (+) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| ABUS37_RS01625 | fimU | 344080..344553 (+) | 474 | WP_001214065.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| ABUS37_RS01630 | pilV | 344547..345107 (+) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| ABUS37_RS01635 | pilW | 345108..346109 (+) | 1002 | WP_000079197.1 | PilW family protein | Machinery gene |
| ABUS37_RS01640 | pilX | 346106..346924 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16837.43 Da Isoelectric Point: 8.5355
>NTDB_id=1053279 ABUS37_RS01625 WP_001214065.1 344080..344553(+) (fimU) [Acinetobacter baumannii strain Lv347]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=1053279 ABUS37_RS01625 WP_001214065.1 344080..344553(+) (fimU) [Acinetobacter baumannii strain Lv347]
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTGGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTGGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |