Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ABUS46_RS10090 | Genome accession | NZ_CP169798 |
| Coordinates | 2128540..2128920 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain Hv781 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2123540..2133920
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABUS46_RS10060 | tadA | 2123659..2124162 (-) | 504 | WP_031960449.1 | tRNA adenosine(34) deaminase TadA | - |
| ABUS46_RS10065 | - | 2124169..2125293 (-) | 1125 | WP_109067466.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ABUS46_RS10070 | ung | 2125290..2126003 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| ABUS46_RS10075 | - | 2126054..2126650 (-) | 597 | WP_000908453.1 | 6-carboxytetrahydropterin synthase | - |
| ABUS46_RS10080 | gspK | 2126880..2127839 (-) | 960 | WP_031960447.1 | type II secretion system minor pseudopilin GspK | - |
| ABUS46_RS10085 | xcpW | 2127839..2128540 (-) | 702 | WP_000594580.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ABUS46_RS10090 | xcpV | 2128540..2128920 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ABUS46_RS10095 | - | 2128910..2129464 (-) | 555 | WP_000841367.1 | type II secretion system protein | - |
| ABUS46_RS10100 | - | 2129474..2130082 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ABUS46_RS10105 | - | 2130120..2130893 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| ABUS46_RS10110 | - | 2130911..2131252 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ABUS46_RS10115 | - | 2131264..2132244 (-) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| ABUS46_RS10120 | kdsB | 2132256..2133017 (-) | 762 | WP_000680701.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1053159 ABUS46_RS10090 WP_000836911.1 2128540..2128920(-) (xcpV) [Acinetobacter baumannii strain Hv781]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1053159 ABUS46_RS10090 WP_000836911.1 2128540..2128920(-) (xcpV) [Acinetobacter baumannii strain Hv781]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACTAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACTAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |