Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8902_RS05260 | Genome accession | NZ_AP028388 |
| Coordinates | 1019604..1019906 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain BCH-11399 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1014604..1024906
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8902_RS05235 (B11399_10230) | rpsR | 1014967..1015227 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8902_RS05240 (B11399_10240) | lon | 1015287..1017662 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| R8902_RS05245 (B11399_10250) | - | 1017679..1018326 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| R8902_RS05250 (B11399_10260) | fliW | 1018487..1018876 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8902_RS05255 (B11399_10270) | proC | 1018876..1019607 (+) | 732 | WP_002854026.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8902_RS05260 (B11399_10280) | ctsT | 1019604..1019906 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| R8902_RS05265 (B11399_10290) | - | 1019903..1020565 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| R8902_RS05270 (B11399_10300) | - | 1020562..1021014 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| R8902_RS05275 (B11399_10310) | hemD | 1021011..1021640 (-) | 630 | WP_002858312.1 | uroporphyrinogen-III synthase | - |
| R8902_RS05280 (B11399_10320) | thiE | 1021618..1022250 (-) | 633 | WP_070254031.1 | thiamine phosphate synthase | - |
| R8902_RS05285 (B11399_10330) | thiD | 1022240..1023052 (-) | 813 | WP_002858043.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8902_RS05290 (B11399_10340) | - | 1023049..1023735 (-) | 687 | WP_002858132.1 | endonuclease III domain-containing protein | - |
| R8902_RS05295 (B11399_10350) | - | 1023732..1024493 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=105305 R8902_RS05260 WP_002853046.1 1019604..1019906(+) (ctsT) [Campylobacter jejuni strain BCH-11399]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=105305 R8902_RS05260 WP_002853046.1 1019604..1019906(+) (ctsT) [Campylobacter jejuni strain BCH-11399]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGTATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGTATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |