Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilS   Type   Regulator
Locus tag   ABUS31_RS00795 Genome accession   NZ_CP169785
Coordinates   162319..163887 (-) Length   522 a.a.
NCBI ID   WP_001160333.1    Uniprot ID   A0A658YHR0
Organism   Acinetobacter baumannii strain Hv652     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 157319..168887
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABUS31_RS00780 gpmI 158122..159669 (+) 1548 WP_000128749.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -
  ABUS31_RS00785 - 159685..160869 (+) 1185 WP_000942504.1 S41 family peptidase -
  ABUS31_RS00790 pilR 160873..162294 (-) 1422 WP_000840549.1 sigma-54 dependent transcriptional regulator Regulator
  ABUS31_RS00795 pilS 162319..163887 (-) 1569 WP_001160333.1 PAS domain-containing sensor histidine kinase Regulator
  ABUS31_RS00800 - 163898..164533 (-) 636 WP_000633799.1 response regulator -
  ABUS31_RS00805 pbpG 164746..165792 (+) 1047 WP_003384760.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  ABUS31_RS00810 thrC 165899..167038 (-) 1140 WP_000063593.1 threonine synthase -
  ABUS31_RS00815 - 167094..168395 (-) 1302 WP_000805827.1 homoserine dehydrogenase -

Sequence


Protein


Download         Length: 522 a.a.        Molecular weight: 59183.75 Da        Isoelectric Point: 6.6142

>NTDB_id=1052965 ABUS31_RS00795 WP_001160333.1 162319..163887(-) (pilS) [Acinetobacter baumannii strain Hv652]
MQFPLNSSLSHTIFRLGTWYGLYRLIIAVSLNIILVLTDAQTDNSLQQPALYSYTLLGYSLLSLVQLLCFKFIATQATRQ
LILFFIVDIICLSLLTFSVGEPNLQLSLLYVIAIFTSAILLSARMSLLITLLAVIAVIYQRFVGSLFDYNNLNTIGNSAL
LAFLFFVVHGIGQIAVQRFKLLEALTFHQSIELYQLQNINRYILEQIEEGYLVLDENYDIVVSNPAACSLLGIPPQFANE
KYPLAKWHADLFEILKFGDLKEGDRFIFESRLSAYSINIKVQHLLVPQQTLTLLILQDAQQINQQAQQLKLAALGQLSAS
IAHEIRNPLAAIVQANELLKDSDPEQQNTLRHMIGKQTKRIDSIVQDTLGLARSERTHPIQIDVKHFIVTLLEEDLFDVK
HSIQLKISDSSLKFLFDEKQLRQVMINLVRNALRHNAPDSPYITINIHSQTNKIYIDVIDYGEGVSKRDISQLFKPFFST
EINGTGLGLYLSHSFCEANHAKLTYVEQKQGACFRIECPIIY

Nucleotide


Download         Length: 1569 bp        

>NTDB_id=1052965 ABUS31_RS00795 WP_001160333.1 162319..163887(-) (pilS) [Acinetobacter baumannii strain Hv652]
ATGCAATTTCCCTTAAATTCATCCTTGTCCCATACGATTTTTCGTTTGGGCACTTGGTATGGCTTATACCGTCTTATTAT
TGCGGTTAGCCTGAATATTATTTTGGTTTTAACCGATGCGCAAACTGATAACAGTTTGCAGCAACCTGCCTTATATTCCT
ACACACTACTCGGGTATTCCCTCTTAAGTCTTGTTCAGCTGTTATGCTTTAAATTTATTGCTACTCAAGCCACGCGACAG
CTTATTTTATTTTTTATTGTTGATATTATTTGTTTGAGTTTACTGACTTTTTCTGTGGGTGAACCAAATTTACAACTCAG
CTTACTCTATGTAATTGCCATCTTTACCTCGGCGATTTTACTTAGCGCAAGAATGTCTTTGCTGATTACATTGCTTGCGG
TTATCGCTGTTATTTACCAACGATTTGTAGGTAGTCTATTTGACTATAACAATCTAAATACTATTGGTAATAGCGCTCTC
TTAGCTTTCTTATTTTTTGTGGTTCACGGTATTGGCCAAATTGCTGTGCAGCGCTTTAAATTACTTGAAGCACTCACCTT
TCACCAGTCAATTGAACTTTATCAACTCCAAAATATTAACCGTTATATCTTAGAACAAATTGAAGAAGGCTATTTAGTTT
TAGATGAGAATTACGACATCGTTGTCAGTAATCCTGCGGCCTGTTCACTCTTGGGTATTCCCCCTCAATTTGCCAATGAA
AAATATCCTTTAGCAAAGTGGCATGCCGATTTATTTGAAATTTTAAAGTTTGGCGACTTAAAAGAAGGTGACCGATTCAT
TTTTGAGTCTCGGCTATCGGCGTACTCCATCAACATTAAAGTGCAACATCTTTTGGTCCCACAACAAACGCTAACCCTGC
TCATTTTACAAGATGCACAGCAGATTAATCAGCAAGCACAACAGCTTAAGCTTGCTGCGCTAGGGCAACTCTCAGCAAGT
ATTGCACATGAGATCCGCAATCCTCTCGCTGCAATCGTACAAGCAAATGAGTTACTGAAAGATAGCGATCCAGAACAACA
AAATACTTTGCGTCATATGATTGGCAAACAAACCAAACGTATTGATAGTATTGTTCAAGATACCTTAGGGCTTGCTCGTA
GCGAAAGAACACATCCTATCCAGATCGATGTAAAACACTTCATAGTTACATTGCTCGAAGAAGATTTATTTGACGTTAAA
CATTCAATTCAACTTAAAATTTCGGATAGTTCTTTAAAATTTTTATTTGATGAAAAACAATTAAGACAAGTCATGATTAA
TCTGGTGAGAAATGCTTTACGGCATAATGCCCCCGACTCACCGTACATTACGATCAACATTCATTCACAGACAAATAAAA
TTTATATTGATGTGATCGATTACGGTGAAGGTGTTTCAAAACGTGATATATCTCAATTATTTAAACCATTTTTTAGTACC
GAAATTAATGGAACTGGTTTAGGATTATATTTGTCTCATAGTTTTTGTGAGGCGAACCATGCAAAGCTCACCTATGTAGA
GCAAAAACAAGGGGCATGCTTCAGAATAGAATGCCCAATAATATATTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A658YHR0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

99.617

100

0.996


Multiple sequence alignment