Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   ABUS03_RS17085 Genome accession   NZ_CP169782
Coordinates   3517607..3518491 (-) Length   294 a.a.
NCBI ID   WP_031961328.1    Uniprot ID   A0AAD2U3W3
Organism   Acinetobacter baumannii strain Hv640     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3512607..3523491
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABUS03_RS17070 miaB 3514454..3515905 (+) 1452 WP_000218141.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -
  ABUS03_RS17075 - 3515943..3517031 (+) 1089 WP_031961327.1 PhoH family protein -
  ABUS03_RS17080 ybeY 3517041..3517517 (+) 477 WP_000703571.1 rRNA maturation RNase YbeY -
  ABUS03_RS17085 tonB2 3517607..3518491 (-) 885 WP_031961328.1 energy transducer TonB Machinery gene
  ABUS03_RS17090 - 3518722..3519393 (+) 672 WP_031961329.1 hypothetical protein -
  ABUS03_RS17095 - 3519551..3520264 (+) 714 WP_031965182.1 DUF3108 domain-containing protein -
  ABUS03_RS17100 - 3520337..3520912 (+) 576 WP_000543071.1 xanthine phosphoribosyltransferase -
  ABUS03_RS17105 wrbA 3520965..3521558 (-) 594 WP_001183355.1 NAD(P)H:quinone oxidoreductase -
  ABUS03_RS17110 - 3521846..3523093 (+) 1248 WP_000893466.1 YihY family inner membrane protein -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33686.53 Da        Isoelectric Point: 9.0935

>NTDB_id=1052950 ABUS03_RS17085 WP_031961328.1 3517607..3518491(-) (tonB2) [Acinetobacter baumannii strain Hv640]
MLKKRSLSIEPFYYWWQDRVFIAAIILAILLHIFVLLIHFAMPAPSEQSTKEIAISIRPTEDVIKHADFLAQADQQGSGA
FREAHRMSSNSPTPMPSDASTGEAQLETFEKVQQQRELKFEEKVLMTVLSWQKQAEESQRKKALEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYPEEAKQQQLKGEVRLMVILNAQGGIRAIRL
LESSGHPVLDEAAKASVRRGAPFGRFDANMKDISELRIIRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=1052950 ABUS03_RS17085 WP_031961328.1 3517607..3518491(-) (tonB2) [Acinetobacter baumannii strain Hv640]
ATGTTGAAAAAAAGAAGTCTATCCATAGAGCCTTTTTATTATTGGTGGCAAGACCGAGTCTTTATCGCTGCAATAATATT
AGCAATCTTACTGCATATTTTTGTGTTGCTCATCCATTTTGCGATGCCTGCGCCATCAGAACAATCGACTAAAGAAATTG
CAATATCGATTCGTCCTACTGAAGATGTGATCAAGCATGCAGACTTTTTAGCTCAAGCCGATCAACAAGGTTCAGGAGCT
TTTCGGGAAGCTCATCGGATGTCGAGTAACTCTCCAACGCCTATGCCAAGTGATGCTTCAACAGGAGAAGCTCAGCTAGA
AACTTTCGAAAAAGTGCAGCAACAAAGAGAACTTAAATTTGAAGAAAAAGTACTCATGACTGTATTGAGTTGGCAGAAAC
AAGCAGAGGAGAGCCAAAGAAAAAAAGCACTTGAACAATTACAAAGTCAGTTTCAGGCAAAAGCTGCCATGGTAGCGAGT
CTTGAAGCTCAGTATTTACAACGTCAGCAAGATTTTAGTCGCCAACAAAAGATAAAAACAGTAGATGGTATTCAAGCCAA
GAAAGATGCGTCAGCAGCTTATCTAGATAAATTTCGTGAAAAAGTAGAGCTTTATGGCAACCGTTATTATCCAGAAGAAG
CGAAACAGCAACAGTTAAAAGGTGAAGTTCGCCTTATGGTAATTTTGAATGCTCAAGGGGGAATTCGTGCAATTCGTTTG
CTTGAAAGCTCAGGTCATCCAGTTCTAGATGAAGCAGCAAAGGCATCGGTACGGCGTGGAGCGCCGTTTGGCCGTTTTGA
TGCAAATATGAAAGATATTTCAGAGCTTCGTATTATTCGTACATGGCGTTTTGATCCAGCTGAAGCTGAATTTGAAGTTC
ATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

99.32

100

0.993

Multiple sequence alignment