Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ABUS15_RS11275 | Genome accession | NZ_CP169773 |
| Coordinates | 2371654..2372034 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain Hv431 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2366654..2377034
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABUS15_RS11245 | tadA | 2366773..2367276 (-) | 504 | WP_031960449.1 | tRNA adenosine(34) deaminase TadA | - |
| ABUS15_RS11250 | - | 2367283..2368407 (-) | 1125 | WP_109067466.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ABUS15_RS11255 | ung | 2368404..2369117 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| ABUS15_RS11260 | - | 2369168..2369764 (-) | 597 | WP_000908453.1 | 6-carboxytetrahydropterin synthase | - |
| ABUS15_RS11265 | gspK | 2369994..2370953 (-) | 960 | WP_031960447.1 | type II secretion system minor pseudopilin GspK | - |
| ABUS15_RS11270 | xcpW | 2370953..2371654 (-) | 702 | WP_000594580.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ABUS15_RS11275 | xcpV | 2371654..2372034 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ABUS15_RS11280 | - | 2372024..2372578 (-) | 555 | WP_000841367.1 | type II secretion system protein | - |
| ABUS15_RS11285 | - | 2372588..2373196 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ABUS15_RS11290 | - | 2373234..2374007 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| ABUS15_RS11295 | - | 2374025..2374366 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ABUS15_RS11300 | - | 2374378..2375358 (-) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| ABUS15_RS11305 | kdsB | 2375370..2376131 (-) | 762 | WP_000680701.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1052815 ABUS15_RS11275 WP_000836911.1 2371654..2372034(-) (xcpV) [Acinetobacter baumannii strain Hv431]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1052815 ABUS15_RS11275 WP_000836911.1 2371654..2372034(-) (xcpV) [Acinetobacter baumannii strain Hv431]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACTAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACTAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |