Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8631_RS06035 | Genome accession | NZ_AP028387 |
| Coordinates | 1140969..1141271 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain BCH-11353 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1135969..1146271
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8631_RS06010 (B11353_12150) | rpsR | 1136331..1136591 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8631_RS06015 (B11353_12160) | lon | 1136652..1139027 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| R8631_RS06020 (B11353_12170) | bamD | 1139044..1139691 (-) | 648 | WP_052802090.1 | outer membrane protein assembly factor BamD | - |
| R8631_RS06025 (B11353_12180) | fliW | 1139852..1140241 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8631_RS06030 (B11353_12190) | proC | 1140241..1140972 (+) | 732 | WP_308042774.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8631_RS06035 (B11353_12200) | ctsT | 1140969..1141271 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| R8631_RS06040 (B11353_12210) | - | 1141268..1141930 (+) | 663 | WP_308042773.1 | hypothetical protein | - |
| R8631_RS06045 (B11353_12220) | - | 1141927..1142379 (+) | 453 | WP_070293668.1 | hypothetical protein | - |
| R8631_RS06050 (B11353_12230) | hemD | 1142376..1143005 (-) | 630 | WP_070296718.1 | uroporphyrinogen-III synthase | - |
| R8631_RS06055 (B11353_12240) | thiE | 1142983..1143615 (-) | 633 | WP_052845929.1 | thiamine phosphate synthase | - |
| R8631_RS06060 (B11353_12250) | thiD | 1143605..1144417 (-) | 813 | WP_308042771.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8631_RS06065 (B11353_12260) | - | 1144414..1145100 (-) | 687 | WP_070296717.1 | endonuclease III domain-containing protein | - |
| R8631_RS06070 (B11353_12270) | - | 1145097..1145858 (-) | 762 | WP_002882600.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=105278 R8631_RS06035 WP_002853046.1 1140969..1141271(+) (ctsT) [Campylobacter jejuni strain BCH-11353]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=105278 R8631_RS06035 WP_002853046.1 1140969..1141271(+) (ctsT) [Campylobacter jejuni strain BCH-11353]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |