Detailed information NTG1052731

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: ACB691_RS25905
• Genome accession: NZ_CP169739
• Coordinates: 5005546..5006895 (-)
• Length: 449 a.a.
• NCBI ID: WP_000879439.1
• Uniprot ID: -
• Organism: Bacillus paranthracis strain mr-1B
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5000546..5011895

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACB691_RS25885	secA	5000870..5003377 (-)	2508	WP_000579382.1	preprotein translocase subunit SecA	-
ACB691_RS25890	hpf	5003652..5004194 (-)	543	WP_000671190.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
ACB691_RS25895	cspC	5004518..5004715 (-)	198	WP_001162041.1	cold shock protein CspC	-
ACB691_RS25900	-	5004842..5005546 (-)	705	WP_001998620.1	ComF family protein	-
ACB691_RS25905	comFA	5005546..5006895 (-)	1350	WP_000879439.1	ATP-dependent helicase ComFA	Machinery gene
ACB691_RS25910	-	5007022..5008467 (-)	1446	WP_000499501.1	NlpC/P60 family protein	-
ACB691_RS25915	-	5008615..5008929 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
ACB691_RS25920	-	5009103..5009945 (-)	843	WP_000844764.1	DegV family protein	-
ACB691_RS25925	-	5010185..5010820 (+)	636	WP_000926683.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51069.57 Da
• Isoelectric Point: 9.7406

>NTDB_id=1052731 ACB691_RS25905 WP_000879439.1 5005546..5006895(-) (comFA) [Bacillus paranthracis strain mr-1B]
MLAGKQLLLEELSSDLRRELSDLKKKGEVVCVQGITKNTSKYICQRCGNIEQRLFASFLCKRCGKACAYCRKCITMGRVS
ECTVLVRGIHERNGDRELNPLQWNGALSIGQELAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGIEEALQKGERVCIAT
PRTDVVLELAPRLQEVFPSITVAALYGGSVDHKKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVRQAM
KEKAARIYLTATPDEKWKRNFRRGKQKGIIVSGRYHRHPLPVPLFSWCGNWKKSLHHKKIPRVLLQWLKMNLNKKYPIFL
FVPHVRYIEEISQLLKGLDNRIDGVHAEDSMRKEKVASFRKGDIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEEPYGEVMYFHYGKTEAMVRAKKHIQSMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=1052731 ACB691_RS25905 WP_000879439.1 5005546..5006895(-) (comFA) [Bacillus paranthracis strain mr-1B]
ATGCTTGCTGGAAAACAGTTGCTATTAGAAGAACTCTCTTCAGATTTACGGAGAGAATTAAGTGATTTGAAAAAGAAGGG
AGAGGTTGTATGTGTACAAGGTATAACAAAGAATACTTCTAAATATATATGTCAGCGCTGCGGAAATATAGAGCAGCGGC
TATTTGCATCATTTTTATGTAAAAGGTGCGGTAAAGCATGTGCGTATTGCCGGAAGTGTATCACGATGGGGAGAGTTAGC
GAATGTACTGTACTTGTTCGCGGGATTCATGAAAGAAACGGAGACAGGGAGCTAAATCCATTACAGTGGAATGGGGCTTT
ATCGATTGGTCAGGAGTTGGCGGCGCAAGGAGTTATAGAAGCGATTAAGCAGAAAGAATCTTTTTTTATTTGGGCTGTGT
GCGGGGCTGGAAAAACAGAAATGTTATTTTACGGTATAGAAGAGGCGCTCCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCAAGGACTGACGTTGTACTGGAATTAGCGCCGAGATTACAAGAAGTGTTTCCAAGTATAACTGTAGCTGCTTTATACGG
AGGGAGTGTAGATCATAAAAAAGATGCAGCGTTAGTCGTTGCAACGACTCACCAACTGTTACGTTACTATAGAGCGTTTC
ATGTGATGATTGTAGATGAGATTGATGCCTTCCCGTATCATGCAGATCAAATGTTACAGTATGCAGTTAGGCAAGCAATG
AAAGAGAAAGCAGCGCGTATTTATTTAACTGCAACCCCTGATGAAAAGTGGAAGCGTAATTTCAGAAGAGGGAAACAAAA
AGGTATCATTGTTTCGGGAAGATACCATCGTCACCCGTTACCAGTTCCTCTATTTAGTTGGTGCGGAAATTGGAAGAAAA
GCCTCCATCATAAAAAAATTCCTCGTGTGTTACTACAATGGTTAAAAATGAACTTAAACAAAAAGTATCCTATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGAAATAAGTCAGTTGTTGAAAGGGTTGGATAATAGAATCGATGGCGTGCATGC
AGAAGATTCGATGAGAAAAGAAAAAGTAGCATCTTTCAGAAAGGGAGACATTCCGTTATTAGTTACAACGACAATTTTAG
AAAGAGGAGTAACTGTGAAGAACTTACAAGTGGCTGTGTTAGGAGCTGAAGAAGAAATTTTTTCAGAGAGTGCGCTCGTA
CAAATTGCAGGCCGAGCGGGGCGTAGTTTTGAAGAGCCATATGGTGAGGTTATGTATTTTCATTACGGTAAGACAGAGGC
AATGGTACGCGCGAAAAAACATATTCAAAGTATGAACAAAAATGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Type III restriction enzyme, res subunit (ResIII) (110-254)

• Helicase conserved C-terminal domain (Helicase_C) (311-408)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	52.392	93.096	0.488
comFA	Latilactobacillus sakei subsp. sakei 23K	40	90.2	0.361