Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   ACB691_RS19775 Genome accession   NZ_CP169739
Coordinates   3883683..3884117 (-) Length   144 a.a.
NCBI ID   WP_000811499.1    Uniprot ID   A0A1J9ZQC5
Organism   Bacillus paranthracis strain mr-1B     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 3878683..3889117
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB691_RS19755 - 3878758..3879546 (+) 789 WP_082181718.1 RNA-guided endonuclease TnpB family protein -
  ACB691_RS19760 - 3879706..3880263 (+) 558 WP_000062073.1 PadR family transcriptional regulator -
  ACB691_RS19765 metE 3880931..3883219 (+) 2289 WP_001007595.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  ACB691_RS19770 comJ 3883257..3883646 (-) 390 WP_000424017.1 competence protein ComJ -
  ACB691_RS19775 nucA/comI 3883683..3884117 (-) 435 WP_000811499.1 DNA-entry nuclease Machinery gene
  ACB691_RS19780 - 3884354..3885103 (+) 750 WP_000388462.1 DUF3967 domain-containing protein -
  ACB691_RS19785 kinB 3885157..3886431 (-) 1275 WP_000420384.1 sporulation sensor histidine kinase KinB -
  ACB691_RS19790 - 3886741..3886941 (+) 201 WP_000929285.1 hypothetical protein -
  ACB691_RS19795 - 3887065..3888222 (+) 1158 WP_000434580.1 aminotransferase A -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 15996.35 Da        Isoelectric Point: 8.4331

>NTDB_id=1052716 ACB691_RS19775 WP_000811499.1 3883683..3884117(-) (nucA/comI) [Bacillus paranthracis strain mr-1B]
MKQLKGIIISIIAILSIVVAVYEVLVPEETSIKKTNAYDQVLEFPKDRYPETGKHITDAIKEGHSEVCTIDRGGAADRRK
LSLAPYPSKKGYDRDEWPMAMCKEGGKGAHIEYISPADNRGAGSWVGNKLDKYPDGTRVKFDVK

Nucleotide


Download         Length: 435 bp        

>NTDB_id=1052716 ACB691_RS19775 WP_000811499.1 3883683..3884117(-) (nucA/comI) [Bacillus paranthracis strain mr-1B]
ATGAAGCAATTAAAAGGTATTATCATTTCAATTATTGCAATTCTTTCTATTGTAGTAGCGGTGTATGAAGTGCTTGTTCC
AGAGGAAACAAGTATTAAAAAAACAAATGCGTATGATCAAGTTCTAGAATTTCCGAAAGATCGATACCCAGAGACAGGGA
AACATATTACGGATGCTATAAAAGAAGGGCATTCAGAAGTGTGTACAATCGACCGTGGTGGCGCTGCGGATAGAAGAAAA
TTATCGTTAGCTCCATACCCATCAAAAAAAGGGTATGATCGTGATGAATGGCCAATGGCGATGTGTAAAGAAGGCGGAAA
AGGAGCGCACATCGAATATATAAGTCCAGCAGATAATCGCGGAGCAGGCTCTTGGGTAGGAAATAAGTTAGATAAATACC
CAGATGGTACGCGTGTAAAATTTGACGTAAAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(49-139)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1J9ZQC5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

72.072

77.083

0.556

Multiple sequence alignment