Detailed information NTG1052700

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: ACB691_RS06170
• Genome accession: NZ_CP169739
• Coordinates: 1203374..1205974 (+)
• Length: 866 a.a.
• NCBI ID: WP_000365374.1
• Uniprot ID: A0A9X8SEK1
• Organism: Bacillus paranthracis strain mr-1B
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1198374..1210974

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACB691_RS06135	prsA	1199134..1199991 (-)	858	WP_001214231.1	peptidylprolyl isomerase PrsA	-
ACB691_RS06140	-	1200121..1200252 (-)	132	WP_001120845.1	DUF3941 domain-containing protein	-
ACB691_RS06145	-	1200353..1201210 (+)	858	WP_000364453.1	YitT family protein	-
ACB691_RS06150	-	1201236..1201433 (-)	198	WP_000527400.1	DUF3813 domain-containing protein	-
ACB691_RS06155	-	1201434..1201574 (-)	141	WP_000516816.1	hypothetical protein	-
ACB691_RS06160	-	1201680..1202489 (-)	810	WP_276105258.1	Cof-type HAD-IIB family hydrolase	-
ACB691_RS06165	-	1202983..1203162 (+)	180	WP_000531418.1	YjzC family protein	-
ACB691_RS06170	clpC	1203374..1205974 (+)	2601	WP_000365374.1	ATP-dependent chaperone ClpB	Regulator
ACB691_RS06175	-	1206012..1206194 (-)	183	WP_001211114.1	YjzD family protein	-
ACB691_RS06180	-	1206351..1207085 (+)	735	WP_000028699.1	hydrolase	-
ACB691_RS06185	-	1207115..1207987 (+)	873	WP_033687846.1	NAD(P)-dependent oxidoreductase	-
ACB691_RS06190	comZ	1208041..1208217 (+)	177	WP_009879752.1	ComZ family protein	Regulator
ACB691_RS06195	fabH	1208460..1209392 (+)	933	WP_001100541.1	beta-ketoacyl-ACP synthase III	-
ACB691_RS06200	fabF	1209424..1210662 (+)	1239	WP_000412651.1	beta-ketoacyl-ACP synthase II	-

Sequence

Protein

• Length: 866 a.a.
• Molecular weight: 97527.51 Da
• Isoelectric Point: 5.1557

>NTDB_id=1052700 ACB691_RS06170 WP_000365374.1 1203374..1205974(+) (clpC) [Bacillus paranthracis strain mr-1B]
MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEALKQGAENLIKKKPSVTGSGAE
AGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLLAFTEEKGDINQLFTRFHITKDNLLQSLMTVRGNQRVTSQNPEAT
YEALEKYGRDLVAEVRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI
FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD
EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEA
CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHKVRDLRE
HLERLRRELEEAEGNYDLNRAAELRHGKIPAIEKELKEAEEMGANNKQENRLLREEVSEEEIADIVSRWTGIPVAKLVEG
EREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI
IMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPLTTNEIKGIVDKIVKELQGRLADRHIT
VQLTDAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIAGTITDNSHVVVDVENNELVVHVK

Nucleotide

• Length: 2601 bp

>NTDB_id=1052700 ACB691_RS06170 WP_000365374.1 1203374..1205974(+) (clpC) [Bacillus paranthracis strain mr-1B]
ATGGACTTAAATCAAATGACAACAAAAACACAAGAGGCGATTATGAGTGCCCAATCTTTAGCGGTATCTCATCACCATCA
AGAAGTAGATACTGTTCATCTCTTGTTTACATTATTAGAAGAGCAAGATGGGTTAGCAGTACGTATTTTTCAAAAAATGA
ACGTCGATATAGAAGCATTAAAACAAGGCGCCGAAAATTTAATTAAGAAAAAGCCTTCCGTAACGGGGAGCGGTGCAGAA
GCAGGTAAATTATATATAACAGGTGCTCTGCAACAACTACTTGTAAGAGCAGGAAAAGAAGCAGAGAAATTGCAAGATGA
TTACATTTCAGTGGAACATGTATTACTTGCTTTTACTGAAGAAAAAGGCGATATAAACCAATTATTTACAAGATTTCATA
TTACGAAAGATAACTTATTACAGTCTTTAATGACAGTTCGGGGGAATCAAAGAGTGACTAGTCAAAATCCAGAAGCAACT
TATGAAGCGTTAGAAAAATATGGTCGTGATTTAGTAGCGGAAGTAAGAGCGGGGAAAATTGACCCTGTTATCGGCCGCGA
TAGTGAAATTCGCCGCGTAATCCGCATTCTTTCACGTAAAACGAAAAACAACCCAGTTTTAATTGGTGAACCAGGTGTTG
GTAAAACAGCAATTGTTGAAGGGTTAGCACAGCGTATTGTGAAAAAGGATGTACCTGAAGGATTAAAAGATAGAACAATC
TTTGCATTAGATATGAGTGCGCTTGTAGCTGGAGCGAAATTCCGCGGTGAATTTGAAGAGCGTCTCCAAGCTGTATTAAA
TGAAATTAAAAAGAGTGAAGGACGCATTTTATTATTCATTGATGAACTTCATACAATTGTCGGCGCTGGTAAAACAGAAG
GCGCAATGGATGCAGGAAATATGTTAAAACCGATGCTTGCGCGTGGTGAACTGCATTGTATCGGGGCGACGACACTAGAT
GAATATCGTAAATATATTGAGAAAGATCCAGCTCTAGAAAGACGTTTCCAACAAGTATTAGCAGAAGAACCAACCGTTGA
AGATACAATTTCCATTTTACGTGGTTTAAAAGAGCGTTTTGAAATTTATCATGGTGTAAATATTCATGACCGCGCGATTG
TAGCAGCATCAGTTTTATCAGATCGATATATTTCGGACCGTTTCTTGCCGGATAAAGCAATTGATCTTGTTGACGAAGCG
TGCGCAACAATTCGTACAGAAATTGATTCTATGCCAACAGAATTAGATGAAGTAACGCGTCGCATTATGCAGCTGGAAAT
TGAAGAAGCAGCTCTTGGAAAAGAGAAAGACTTTGGTAGCCAAGAACGTCTAAAAACATTGCAACGTGAATTATCGGATT
TAAAAGAAGTGGCAAGTGGCATGAGAGCCAAATGGGAGAAAGAAAAAGAAGATATTCACAAAGTTCGTGACTTACGTGAA
CATTTAGAGCGTCTGCGCCGTGAATTAGAAGAAGCAGAAGGTAATTACGACTTAAATAGAGCAGCGGAACTTCGCCACGG
AAAAATTCCTGCAATTGAAAAAGAGTTAAAAGAAGCAGAAGAAATGGGCGCGAATAATAAACAAGAAAATCGTTTATTAC
GTGAGGAAGTAAGTGAAGAAGAGATTGCTGATATTGTTTCACGCTGGACTGGTATTCCTGTCGCAAAACTCGTTGAAGGT
GAACGTGAGAAATTATTACGATTAGAGCAAATTTTATCAGAGCGTGTTATCGGACAAGAAGAAGCGGTAAGCCTAGTATC
AGACGCAGTTCTTCGTGCTCGTGCTGGTATTAAAGACCCGAACCGTCCAATTGGTTCCTTCATCTTCTTAGGACCGACTG
GTGTTGGTAAAACAGAACTTGCAAAAACGTTAGCGCAGTCTTTATTTGATAGTGAAGAGCAAATGATTCGTATTGATATG
TCTGAGTACATGGAGAAACACGCTGTGTCACGCTTAATTGGTGCACCTCCTGGATATGTTGGATATGAAGAGGGCGGTCA
ATTAACAGAAGCAGTAAGACGTAAACCGTATTCTGTTATTTTGTTAGATGAAATCGAAAAAGCACATCCAGAAGTATTCA
ACATTTTATTACAAATGTTAGATGACGGACGCATTACAGATTCGCAAGGACGTACAGTAGACTTTAAAAACACAGTTATT
ATTATGACGTCAAATATTGGATCTGCTCATTTATTAGATGGATTAGAAGAAGATGGCTCAATTAAAGAGGAATCAAGAGA
ACTTGTCATGGGGCAATTAAGAGGACATTTCCGACCAGAGTTTTTAAATCGTGTCGACGAAATTATTTTATTCAAACCTC
TTACAACGAATGAAATTAAAGGTATTGTTGATAAAATTGTAAAAGAATTACAAGGCCGTTTAGCTGACCGTCATATTACG
GTACAATTAACAGACGCAGCGAAAGAGTTTGTTGTCGAAGCTGGCTTCGATCCAATGTACGGAGCTCGTCCGTTAAAACG
ATATGTACAGCGTCAAGTTGAGACGAAATTAGCGAGAGAATTAATTGCAGGAACGATTACTGACAATAGTCATGTAGTTG
TTGATGTAGAAAATAACGAATTAGTCGTTCATGTGAAGTAA

Domains

Predicted by InterproScan.

• AAA lid domain (AAA_lid_9) (345-447)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (774-854)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (17-68)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (97-148)

• ATPase family associated with various cellular activities (AAA) (AAA) (206-339)

• AAA domain (Cdc48 subfamily) (AAA_2) (602-768)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Bacillus subtilis subsp. subtilis str. 168	47.543	100	0.48
clpC	Lactococcus lactis subsp. cremoris KW2	47.199	82.448	0.389