Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8665_RS05680 | Genome accession | NZ_AP028386 |
| Coordinates | 1079709..1080011 (+) | Length | 100 a.a. |
| NCBI ID | WP_317676740.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain BCH-11348 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1074709..1085011
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8665_RS05655 (B11348_11020) | rpsR | 1075071..1075331 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8665_RS05660 (B11348_11030) | lon | 1075392..1077767 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| R8665_RS05665 (B11348_11040) | bamD | 1077784..1078431 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| R8665_RS05670 (B11348_11050) | fliW | 1078592..1078981 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8665_RS05675 (B11348_11060) | proC | 1078981..1079712 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8665_RS05680 (B11348_11070) | ctsT | 1079709..1080011 (+) | 303 | WP_317676740.1 | hypothetical protein | Machinery gene |
| R8665_RS05685 (B11348_11080) | - | 1080008..1080670 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| R8665_RS05690 (B11348_11090) | - | 1080667..1081119 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| R8665_RS05695 (B11348_11100) | hemD | 1081116..1081745 (-) | 630 | WP_044306078.1 | uroporphyrinogen-III synthase | - |
| R8665_RS05700 (B11348_11110) | thiE | 1081723..1082355 (-) | 633 | WP_002856400.1 | thiamine phosphate synthase | - |
| R8665_RS05705 (B11348_11120) | thiD | 1082345..1083157 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8665_RS05710 (B11348_11130) | - | 1083154..1083840 (-) | 687 | WP_317676741.1 | endonuclease III domain-containing protein | - |
| R8665_RS05715 (B11348_11140) | - | 1083837..1084598 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12176.29 Da Isoelectric Point: 6.2957
>NTDB_id=105250 R8665_RS05680 WP_317676740.1 1079709..1080011(+) (ctsT) [Campylobacter jejuni strain BCH-11348]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTLALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTLALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=105250 R8665_RS05680 WP_317676740.1 1079709..1080011(+) (ctsT) [Campylobacter jejuni strain BCH-11348]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTTAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTTAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |