Detailed information
Bioinformatically predicted
Overview
| Name | ctsP | Type | Machinery gene |
| Locus tag | R8574_RS08075 | Genome accession | NZ_AP028385 |
| Coordinates | 1559257..1559865 (-) | Length | 202 a.a. |
| NCBI ID | WP_002851464.1 | Uniprot ID | A0AB36GA54 |
| Organism | Campylobacter jejuni strain BCH-11320 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1554257..1564865
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8574_RS08050 (B11320_16120) | - | 1554414..1555178 (+) | 765 | WP_317647633.1 | TIGR02757 family protein | - |
| R8574_RS08055 (B11320_16130) | - | 1555182..1555952 (+) | 771 | WP_002873601.1 | TSUP family transporter | - |
| R8574_RS08060 (B11320_16140) | ctsF | 1555939..1557120 (-) | 1182 | WP_057041182.1 | type II secretion system F family protein | Machinery gene |
| R8574_RS08065 (B11320_16150) | ctsE | 1557117..1558676 (-) | 1560 | WP_057041180.1 | GspE/PulE family protein | Machinery gene |
| R8574_RS08070 (B11320_16160) | ctsX | 1558666..1559253 (-) | 588 | WP_002851370.1 | membrane protein | Machinery gene |
| R8574_RS08075 (B11320_16170) | ctsP | 1559257..1559865 (-) | 609 | WP_002851464.1 | ATP-binding protein | Machinery gene |
| R8574_RS08080 (B11320_16180) | ctsD | 1559858..1561270 (-) | 1413 | WP_002856543.1 | pilus (MSHA type) biogenesis protein MshL | Machinery gene |
| R8574_RS08085 (B11320_16190) | ctsR | 1561248..1561559 (-) | 312 | WP_002855438.1 | hypothetical protein | Machinery gene |
Sequence
Protein
Download Length: 202 a.a. Molecular weight: 23742.78 Da Isoelectric Point: 9.9955
>NTDB_id=105236 R8574_RS08075 WP_002851464.1 1559257..1559865(-) (ctsP) [Campylobacter jejuni strain BCH-11320]
MSKIIPFREEIFHQINQILESQKAFIFLWGKSGSGKSVLLQRLAKKYNVDFINENFKDQSFLKEKIEFLISQGQSLIILD
EVGMYDYAMLESIRIYSDSISFVLSSHKKLNILKKEHFKSRLSACFKLKNISLLELDDYIKLKFGMNFSNKCLKFLQKIS
QGNLRYIDKTLKSFYEINSFFDKNKSQEYILKLSALENGLLR
MSKIIPFREEIFHQINQILESQKAFIFLWGKSGSGKSVLLQRLAKKYNVDFINENFKDQSFLKEKIEFLISQGQSLIILD
EVGMYDYAMLESIRIYSDSISFVLSSHKKLNILKKEHFKSRLSACFKLKNISLLELDDYIKLKFGMNFSNKCLKFLQKIS
QGNLRYIDKTLKSFYEINSFFDKNKSQEYILKLSALENGLLR
Nucleotide
Download Length: 609 bp
>NTDB_id=105236 R8574_RS08075 WP_002851464.1 1559257..1559865(-) (ctsP) [Campylobacter jejuni strain BCH-11320]
ATGAGTAAAATTATTCCATTTAGAGAAGAAATTTTTCATCAAATCAATCAAATTTTAGAAAGCCAAAAAGCTTTTATTTT
TTTATGGGGAAAAAGTGGTAGTGGTAAAAGTGTATTGTTGCAAAGATTGGCAAAAAAATATAATGTTGATTTTATTAATG
AAAATTTTAAAGATCAGAGTTTCTTAAAAGAAAAAATTGAGTTTTTGATTTCACAAGGTCAGAGTTTAATCATTCTTGAT
GAAGTGGGAATGTATGATTACGCAATGCTAGAAAGCATCAGGATTTATAGTGATTCTATAAGTTTTGTTTTAAGTTCTCA
TAAAAAGTTAAATATACTTAAAAAAGAGCATTTTAAAAGTCGTTTAAGTGCTTGTTTTAAATTGAAAAATATTAGTCTTT
TAGAACTTGATGATTATATTAAATTGAAATTCGGAATGAATTTTTCAAATAAATGTCTTAAGTTTTTACAAAAAATTTCT
CAAGGAAATTTAAGATATATTGATAAAACTTTAAAAAGTTTTTATGAGATAAATAGTTTTTTTGATAAAAACAAAAGTCA
AGAGTATATTTTAAAGCTTAGTGCTTTAGAGAATGGCTTATTAAGGTAA
ATGAGTAAAATTATTCCATTTAGAGAAGAAATTTTTCATCAAATCAATCAAATTTTAGAAAGCCAAAAAGCTTTTATTTT
TTTATGGGGAAAAAGTGGTAGTGGTAAAAGTGTATTGTTGCAAAGATTGGCAAAAAAATATAATGTTGATTTTATTAATG
AAAATTTTAAAGATCAGAGTTTCTTAAAAGAAAAAATTGAGTTTTTGATTTCACAAGGTCAGAGTTTAATCATTCTTGAT
GAAGTGGGAATGTATGATTACGCAATGCTAGAAAGCATCAGGATTTATAGTGATTCTATAAGTTTTGTTTTAAGTTCTCA
TAAAAAGTTAAATATACTTAAAAAAGAGCATTTTAAAAGTCGTTTAAGTGCTTGTTTTAAATTGAAAAATATTAGTCTTT
TAGAACTTGATGATTATATTAAATTGAAATTCGGAATGAATTTTTCAAATAAATGTCTTAAGTTTTTACAAAAAATTTCT
CAAGGAAATTTAAGATATATTGATAAAACTTTAAAAAGTTTTTATGAGATAAATAGTTTTTTTGATAAAAACAAAAGTCA
AGAGTATATTTTAAAGCTTAGTGCTTTAGAGAATGGCTTATTAAGGTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsP | Campylobacter jejuni subsp. jejuni 81-176 |
99.505 |
100 |
0.995 |