Detailed information
Bioinformatically predicted
Overview
| Name | waaF | Type | Regulator |
| Locus tag | R8574_RS06485 | Genome accession | NZ_AP028385 |
| Coordinates | 1234774..1235733 (+) | Length | 319 a.a. |
| NCBI ID | WP_032586265.1 | Uniprot ID | A0A5Y8BL20 |
| Organism | Campylobacter jejuni strain BCH-11320 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1229774..1240733
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8574_RS06455 (B11320_12910) | neuC | 1230364..1231488 (+) | 1125 | WP_052805597.1 | UDP-N-acetylglucosamine 2-epimerase | - |
| R8574_RS06460 (B11320_12920) | - | 1231481..1232098 (+) | 618 | WP_411512339.1 | hypothetical protein | - |
| R8574_RS06465 (B11320_12930) | - | 1232095..1232427 (+) | 333 | WP_265097921.1 | hypothetical protein | - |
| R8574_RS06470 (B11320_12940) | - | 1232424..1233089 (+) | 666 | WP_002935341.1 | cytidylyltransferase domain-containing protein | - |
| R8574_RS06475 (B11320_12950) | - | 1233213..1233911 (+) | 699 | WP_317647559.1 | CatB-related O-acetyltransferase | - |
| R8574_RS06480 (B11320_12960) | waaV | 1233903..1234715 (-) | 813 | WP_002935342.1 | glycosyltransferase family 2 protein | - |
| R8574_RS06485 (B11320_12970) | waaF | 1234774..1235733 (+) | 960 | WP_032586265.1 | glycosyltransferase family 9 protein | Regulator |
| R8574_RS06490 (B11320_12980) | gmhA | 1235714..1236274 (-) | 561 | WP_023890815.1 | D-sedoheptulose 7-phosphate isomerase | - |
| R8574_RS06495 (B11320_12990) | rfaE1 | 1236271..1237656 (-) | 1386 | WP_002896702.1 | D-glycero-beta-D-manno-heptose-7-phosphate kinase | - |
| R8574_RS06500 (B11320_13000) | rfaD | 1237649..1238602 (-) | 954 | WP_002872242.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| R8574_RS06505 (B11320_13010) | gmhB | 1238603..1239163 (-) | 561 | Protein_1261 | D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase | - |
| R8574_RS06510 (B11320_13020) | - | 1239244..1239546 (+) | 303 | WP_002852762.1 | c-type cytochrome | - |
| R8574_RS06515 (B11320_13030) | ccoS | 1239569..1239775 (-) | 207 | WP_002852798.1 | cbb3-type cytochrome oxidase assembly protein CcoS | - |
Sequence
Protein
Download Length: 319 a.a. Molecular weight: 36740.49 Da Isoelectric Point: 10.3923
>NTDB_id=105225 R8574_RS06485 WP_032586265.1 1234774..1235733(+) (waaF) [Campylobacter jejuni strain BCH-11320]
MKIFIHLPTWLGDAVMASLALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGINPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKVEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKICPLKHHKCMKDLKPKRVIEEARNLLKNPHL
MKIFIHLPTWLGDAVMASLALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGINPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKVEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKICPLKHHKCMKDLKPKRVIEEARNLLKNPHL
Nucleotide
Download Length: 960 bp
>NTDB_id=105225 R8574_RS06485 WP_032586265.1 1234774..1235733(+) (waaF) [Campylobacter jejuni strain BCH-11320]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACTTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGAATCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTAGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCGGGAAAAGTCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATTGCTTTTTGTGATCTTTTCATAACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTAAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACTTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGAATCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTAGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCGGGAAAAGTCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATTGCTTTTTGTGATCTTTTCATAACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTAAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| waaF | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
94.044 |
100 |
0.94 |