Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8574_RS06140 | Genome accession | NZ_AP028385 |
| Coordinates | 1166276..1166578 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain BCH-11320 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1161276..1171578
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8574_RS06115 (B11320_12220) | rpsR | 1161638..1161898 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8574_RS06120 (B11320_12230) | lon | 1161959..1164334 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| R8574_RS06125 (B11320_12240) | - | 1164351..1164998 (-) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| R8574_RS06130 (B11320_12250) | fliW | 1165159..1165548 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8574_RS06135 (B11320_12260) | proC | 1165548..1166279 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8574_RS06140 (B11320_12270) | ctsT | 1166276..1166578 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| R8574_RS06145 (B11320_12280) | - | 1166575..1167237 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| R8574_RS06150 (B11320_12290) | - | 1167234..1167686 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| R8574_RS06155 (B11320_12300) | hemD | 1167683..1168312 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| R8574_RS06160 (B11320_12310) | thiE | 1168290..1168922 (-) | 633 | WP_002867188.1 | thiamine phosphate synthase | - |
| R8574_RS06165 (B11320_12320) | thiD | 1168912..1169724 (-) | 813 | WP_002869542.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8574_RS06170 (B11320_12330) | - | 1169721..1170407 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| R8574_RS06175 (B11320_12340) | - | 1170404..1171165 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=105223 R8574_RS06140 WP_002853046.1 1166276..1166578(+) (ctsT) [Campylobacter jejuni strain BCH-11320]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=105223 R8574_RS06140 WP_002853046.1 1166276..1166578(+) (ctsT) [Campylobacter jejuni strain BCH-11320]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |