Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACE2AN_RS02495 Genome accession   NZ_CP169564
Coordinates   485042..485773 (+) Length   243 a.a.
NCBI ID   WP_000889923.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain 6_2F1     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 480042..490773
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACE2AN_RS02465 dnaK 480169..481992 (+) 1824 WP_000034673.1 molecular chaperone DnaK -
  ACE2AN_RS02470 - 481994..482350 (+) 357 WP_000114431.1 hypothetical protein -
  ACE2AN_RS02475 dnaJ 482752..483888 (+) 1137 WP_001066295.1 molecular chaperone DnaJ -
  ACE2AN_RS02480 - 483917..484105 (-) 189 WP_137995932.1 hypothetical protein -
  ACE2AN_RS02485 - 484267..484554 (-) 288 WP_000777753.1 hypothetical protein -
  ACE2AN_RS02490 - 484564..484974 (-) 411 WP_001278301.1 HIT family protein -
  ACE2AN_RS02495 pptA 485042..485773 (+) 732 WP_000889923.1 ABC transporter ATP-binding protein Regulator
  ACE2AN_RS02500 - 485770..486819 (+) 1050 WP_050116080.1 ABC transporter permease -
  ACE2AN_RS02505 - 486987..487316 (-) 330 WP_047499345.1 hypothetical protein -
  ACE2AN_RS02510 - 487592..487930 (+) 339 WP_000876675.1 LytTR family DNA-binding domain-containing protein -
  ACE2AN_RS02515 comE/blpR 487935..488672 (+) 738 WP_001219120.1 LytTR family DNA-binding domain-containing protein Regulator
  ACE2AN_RS02520 - 488686..490026 (+) 1341 WP_061365610.1 sensor histidine kinase -
  ACE2AN_RS02525 blpC 490071..490226 (-) 156 WP_000358814.1 quorum-sensing system pheromone BlpC -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27026.52 Da        Isoelectric Point: 4.7792

>NTDB_id=1052167 ACE2AN_RS02495 WP_000889923.1 485042..485773(+) (pptA) [Streptococcus pneumoniae strain 6_2F1]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLAPYSGSININGLTLQGDATSYRKQIGYIP
ETPSLYEELTLREHIETVAMAYGIEQKVAFERVEPLLKMFRLEQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAISDLIQLLEVEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAKGNLLQLREAFDMPEASLNDIYLALTKE
EDL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=1052167 ACE2AN_RS02495 WP_000889923.1 485042..485773(+) (pptA) [Streptococcus pneumoniae strain 6_2F1]
ATGTTAGAAATTAAAAACCTGACAGGTGGCTATGTTCATGTTCCTGTTTTGAAAGATGTGTCCTTTACTGTTGAAAGTGG
GCAGTTGGTCGGTTTGATTGGTCTCAATGGTGCTGGGAAATCAACGACGATCAATGAGATTATCGGTCTGTTGGCACCTT
ATAGTGGCTCCATCAATATCAATGGCCTGACTCTGCAAGGAGATGCGACTAGCTACCGCAAGCAGATTGGCTACATTCCT
GAGACGCCTAGTCTGTATGAGGAATTGACCCTCAGAGAGCATATCGAAACGGTTGCTATGGCTTACGGTATTGAGCAAAA
AGTGGCTTTCGAACGAGTAGAGCCCTTGTTAAAAATGTTCCGTTTGGAACAGAAATTAGACTGGTTCCCTGTTCATTTTT
CAAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCTTTTGTGGTGGATCCAAGTCTTTTCATCGTGGATGAGCCTTTC
CTTGGTCTTGATCCGCTGGCTATTTCTGATTTGATTCAGCTTTTGGAAGTGGAGAAGCAAAAGGGCAAGTCTATTCTCAT
GAGTACCCACGTGCTGGATTCGGCGGAGAAGATGTGTGATGCCTTTGTCATTCTTCACAAGGGAGAGGTGCGTGCCAAAG
GCAATCTCCTGCAACTACGCGAAGCCTTTGATATGCCTGAGGCTAGTTTGAATGATATTTACTTGGCTCTGACAAAAGAG
GAGGACCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.199

99.177

0.716
  pptA Streptococcus thermophilus LMD-9

71.369

99.177

0.708

Multiple sequence alignment