Detailed information
Bioinformatically predicted
Overview
| Name | rocC | Type | Regulator |
| Locus tag | ACE17W_RS08430 | Genome accession | NZ_CP169562 |
| Coordinates | 1902095..1902787 (+) | Length | 230 a.a. |
| NCBI ID | WP_010945894.1 | Uniprot ID | Q5ZZ78 |
| Organism | Legionella pneumophila strain Lp02 | ||
| Function | rocR chaperone; repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1897095..1907787
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACE17W_RS08410 (ACE17W_08410) | - | 1897716..1897892 (-) | 177 | WP_014840774.1 | dodecin domain-containing protein | - |
| ACE17W_RS08415 (ACE17W_08415) | - | 1898070..1900538 (+) | 2469 | WP_010945891.1 | hypothetical protein | - |
| ACE17W_RS08420 (ACE17W_08420) | dapB | 1900642..1901373 (-) | 732 | WP_010945892.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| ACE17W_RS08425 (ACE17W_08425) | - | 1901553..1901738 (-) | 186 | WP_010945893.1 | hypothetical protein | - |
| ACE17W_RS08430 (ACE17W_08430) | rocC | 1902095..1902787 (+) | 693 | WP_010945894.1 | ProQ/FinO family protein | Regulator |
| ACE17W_RS08435 (ACE17W_08435) | - | 1902788..1903858 (+) | 1071 | WP_010945895.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 230 a.a. Molecular weight: 25741.65 Da Isoelectric Point: 10.7030
>NTDB_id=1052107 ACE17W_RS08430 WP_010945894.1 1902095..1902787(+) (rocC) [Legionella pneumophila strain Lp02]
MRKQALHPRTAVINKAQKNQSKRARSDALLWLAANFPEAFDNSLRIRPLKIGIMSDILQHAEKAEQVGISKSKLREAVVL
FTRRLDYLACLKAREVRIDLHGNPVAEVTEEEAEHASMKIKKRVEKSVKNARKQVNAKAANHSHVNSQPSAVSSVKPMNS
FDSHPEPLLPIYPLRSSTYASQNVAMQSAKSPSVVVKHKAPKQYDPDAVARLKEKLGLSRKAEEKKETTE
MRKQALHPRTAVINKAQKNQSKRARSDALLWLAANFPEAFDNSLRIRPLKIGIMSDILQHAEKAEQVGISKSKLREAVVL
FTRRLDYLACLKAREVRIDLHGNPVAEVTEEEAEHASMKIKKRVEKSVKNARKQVNAKAANHSHVNSQPSAVSSVKPMNS
FDSHPEPLLPIYPLRSSTYASQNVAMQSAKSPSVVVKHKAPKQYDPDAVARLKEKLGLSRKAEEKKETTE
Nucleotide
Download Length: 693 bp
>NTDB_id=1052107 ACE17W_RS08430 WP_010945894.1 1902095..1902787(+) (rocC) [Legionella pneumophila strain Lp02]
ATGAGAAAGCAGGCGCTGCACCCACGAACCGCTGTCATCAATAAAGCACAAAAAAATCAATCCAAGCGAGCGCGATCTGA
CGCATTATTATGGCTTGCGGCTAATTTCCCTGAGGCATTCGATAATTCTTTGCGTATTCGGCCATTAAAGATTGGTATTA
TGTCTGATATATTGCAGCATGCAGAAAAAGCAGAGCAAGTTGGAATTTCTAAAAGTAAATTAAGGGAAGCTGTTGTTCTT
TTTACCCGTCGTCTTGATTATCTGGCTTGCCTGAAAGCTCGTGAAGTCCGTATTGATTTGCACGGAAATCCAGTAGCCGA
GGTTACTGAGGAAGAAGCTGAGCATGCTTCCATGAAAATTAAAAAACGCGTGGAAAAGAGTGTTAAAAATGCTCGCAAAC
AAGTGAATGCAAAAGCGGCTAATCATTCGCATGTAAATAGTCAGCCAAGTGCAGTTTCCAGCGTTAAGCCAATGAATTCG
TTTGACTCTCATCCTGAGCCTCTTTTGCCAATATATCCTCTCAGAAGCTCTACCTATGCCTCACAAAATGTGGCAATGCA
ATCCGCCAAGTCACCATCCGTCGTAGTCAAACATAAAGCACCAAAGCAATATGATCCGGATGCTGTAGCCCGTTTAAAAG
AAAAATTAGGATTGTCTCGAAAAGCAGAAGAGAAAAAGGAAACAACAGAGTAA
ATGAGAAAGCAGGCGCTGCACCCACGAACCGCTGTCATCAATAAAGCACAAAAAAATCAATCCAAGCGAGCGCGATCTGA
CGCATTATTATGGCTTGCGGCTAATTTCCCTGAGGCATTCGATAATTCTTTGCGTATTCGGCCATTAAAGATTGGTATTA
TGTCTGATATATTGCAGCATGCAGAAAAAGCAGAGCAAGTTGGAATTTCTAAAAGTAAATTAAGGGAAGCTGTTGTTCTT
TTTACCCGTCGTCTTGATTATCTGGCTTGCCTGAAAGCTCGTGAAGTCCGTATTGATTTGCACGGAAATCCAGTAGCCGA
GGTTACTGAGGAAGAAGCTGAGCATGCTTCCATGAAAATTAAAAAACGCGTGGAAAAGAGTGTTAAAAATGCTCGCAAAC
AAGTGAATGCAAAAGCGGCTAATCATTCGCATGTAAATAGTCAGCCAAGTGCAGTTTCCAGCGTTAAGCCAATGAATTCG
TTTGACTCTCATCCTGAGCCTCTTTTGCCAATATATCCTCTCAGAAGCTCTACCTATGCCTCACAAAATGTGGCAATGCA
ATCCGCCAAGTCACCATCCGTCGTAGTCAAACATAAAGCACCAAAGCAATATGATCCGGATGCTGTAGCCCGTTTAAAAG
AAAAATTAGGATTGTCTCGAAAAGCAGAAGAGAAAAAGGAAACAACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rocC | Legionella pneumophila str. Paris |
97.391 |
100 |
0.974 |