Detailed information
Bioinformatically predicted
Overview
| Name | ctsP | Type | Machinery gene |
| Locus tag | R8610_RS07580 | Genome accession | NZ_AP028384 |
| Coordinates | 1478453..1479061 (-) | Length | 202 a.a. |
| NCBI ID | WP_002921280.1 | Uniprot ID | A0AA44HKJ2 |
| Organism | Campylobacter jejuni strain BCH-11253 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1473453..1484061
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8610_RS07555 (B11253_14950) | - | 1473610..1474374 (+) | 765 | WP_002921261.1 | TIGR02757 family protein | - |
| R8610_RS07560 (B11253_14960) | - | 1474378..1475142 (+) | 765 | WP_002855301.1 | TSUP family transporter | - |
| R8610_RS07565 (B11253_14970) | ctsF | 1475135..1476316 (-) | 1182 | WP_002921263.1 | type II secretion system F family protein | Machinery gene |
| R8610_RS07570 (B11253_14980) | ctsE | 1476313..1477872 (-) | 1560 | WP_032588785.1 | GspE/PulE family protein | Machinery gene |
| R8610_RS07575 (B11253_14990) | ctsX | 1477862..1478449 (-) | 588 | WP_002921278.1 | hypothetical protein | Machinery gene |
| R8610_RS07580 (B11253_15000) | ctsP | 1478453..1479061 (-) | 609 | WP_002921280.1 | ATP-binding protein | Machinery gene |
| R8610_RS07585 (B11253_15010) | ctsD | 1479054..1480466 (-) | 1413 | WP_002921282.1 | pilus (MSHA type) biogenesis protein MshL | Machinery gene |
| R8610_RS07590 (B11253_15020) | ctsR | 1480444..1480755 (-) | 312 | WP_002862131.1 | hypothetical protein | Machinery gene |
Sequence
Protein
Download Length: 202 a.a. Molecular weight: 23716.66 Da Isoelectric Point: 9.7093
>NTDB_id=105209 R8610_RS07580 WP_002921280.1 1478453..1479061(-) (ctsP) [Campylobacter jejuni strain BCH-11253]
MSKIIPFREEIFHQINQILESQKAFIFLWGKSGSGKSVLLQRLAKKYNVDFINENFKDQSFLKEKIEFLISQGQSLIILD
EVGMYDYAMLESIRIYSDSISFVLSSHKKLNILKKEHFKSRLSACFELKNISLLELDDYIKLKFGMNFSNKCLKFLQKIS
QGNLRYIDKTLKSFYEINSFFDTNKSQEYILKLSALENGLLR
MSKIIPFREEIFHQINQILESQKAFIFLWGKSGSGKSVLLQRLAKKYNVDFINENFKDQSFLKEKIEFLISQGQSLIILD
EVGMYDYAMLESIRIYSDSISFVLSSHKKLNILKKEHFKSRLSACFELKNISLLELDDYIKLKFGMNFSNKCLKFLQKIS
QGNLRYIDKTLKSFYEINSFFDTNKSQEYILKLSALENGLLR
Nucleotide
Download Length: 609 bp
>NTDB_id=105209 R8610_RS07580 WP_002921280.1 1478453..1479061(-) (ctsP) [Campylobacter jejuni strain BCH-11253]
ATGAGTAAAATTATTCCATTTAGAGAAGAAATTTTTCATCAAATCAATCAAATTTTAGAAAGCCAAAAAGCTTTTATTTT
TTTATGGGGAAAAAGTGGTAGCGGTAAAAGTGTATTGTTGCAAAGATTGGCAAAAAAATATAATGTTGATTTTATTAATG
AAAATTTTAAAGATCAGAGTTTCTTAAAAGAAAAAATTGAGTTTTTGATTTCACAAGGTCAGAGTTTAATCATTCTTGAT
GAAGTAGGAATGTATGATTATGCAATGCTAGAAAGCATTAGGATTTATAGTGATTCTATAAGTTTTGTTTTAAGTTCTCA
TAAAAAGTTAAATATACTTAAAAAAGAGCATTTTAAAAGTCGTTTAAGTGCTTGTTTTGAATTGAAAAATATTAGTCTTT
TAGAGCTTGATGATTATATTAAATTGAAATTCGGAATGAATTTTTCAAATAAATGTCTTAAGTTTTTACAAAAAATTTCT
CAAGGAAATTTAAGATATATTGATAAAACTTTAAAAAGTTTTTATGAGATAAATAGTTTTTTTGATACAAACAAAAGTCA
AGAGTATATTTTAAAGCTTAGTGCTTTAGAGAATGGCTTATTAAGGTAA
ATGAGTAAAATTATTCCATTTAGAGAAGAAATTTTTCATCAAATCAATCAAATTTTAGAAAGCCAAAAAGCTTTTATTTT
TTTATGGGGAAAAAGTGGTAGCGGTAAAAGTGTATTGTTGCAAAGATTGGCAAAAAAATATAATGTTGATTTTATTAATG
AAAATTTTAAAGATCAGAGTTTCTTAAAAGAAAAAATTGAGTTTTTGATTTCACAAGGTCAGAGTTTAATCATTCTTGAT
GAAGTAGGAATGTATGATTATGCAATGCTAGAAAGCATTAGGATTTATAGTGATTCTATAAGTTTTGTTTTAAGTTCTCA
TAAAAAGTTAAATATACTTAAAAAAGAGCATTTTAAAAGTCGTTTAAGTGCTTGTTTTGAATTGAAAAATATTAGTCTTT
TAGAGCTTGATGATTATATTAAATTGAAATTCGGAATGAATTTTTCAAATAAATGTCTTAAGTTTTTACAAAAAATTTCT
CAAGGAAATTTAAGATATATTGATAAAACTTTAAAAAGTTTTTATGAGATAAATAGTTTTTTTGATACAAACAAAAGTCA
AGAGTATATTTTAAAGCTTAGTGCTTTAGAGAATGGCTTATTAAGGTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsP | Campylobacter jejuni subsp. jejuni 81-176 |
98.515 |
100 |
0.985 |