Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8610_RS05275 | Genome accession | NZ_AP028384 |
| Coordinates | 1028655..1028957 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain BCH-11253 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1023655..1033957
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8610_RS05250 (B11253_10290) | rpsR | 1024018..1024278 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8610_RS05255 (B11253_10300) | lon | 1024338..1026713 (-) | 2376 | WP_317652868.1 | endopeptidase La | - |
| R8610_RS05260 (B11253_10310) | bamD | 1026730..1027377 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| R8610_RS05265 (B11253_10320) | fliW | 1027538..1027927 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8610_RS05270 (B11253_10330) | proC | 1027927..1028658 (+) | 732 | WP_002921390.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8610_RS05275 (B11253_10340) | ctsT | 1028655..1028957 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| R8610_RS05280 (B11253_10350) | - | 1028954..1029616 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| R8610_RS05285 (B11253_10360) | - | 1029613..1030065 (+) | 453 | WP_002921385.1 | hypothetical protein | - |
| R8610_RS05290 (B11253_10370) | hemD | 1030062..1030691 (-) | 630 | WP_002921384.1 | uroporphyrinogen-III synthase | - |
| R8610_RS05295 (B11253_10380) | thiE | 1030669..1031301 (-) | 633 | WP_002921383.1 | thiamine phosphate synthase | - |
| R8610_RS05300 (B11253_10390) | thiD | 1031291..1032103 (-) | 813 | WP_002921381.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8610_RS05305 (B11253_10400) | - | 1032100..1032786 (-) | 687 | WP_052775526.1 | 3-methyladenine DNA glycosylase | - |
| R8610_RS05310 (B11253_10410) | - | 1032783..1033544 (-) | 762 | WP_002921377.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=105196 R8610_RS05275 WP_002855822.1 1028655..1028957(+) (ctsT) [Campylobacter jejuni strain BCH-11253]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=105196 R8610_RS05275 WP_002855822.1 1028655..1028957(+) (ctsT) [Campylobacter jejuni strain BCH-11253]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTCAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTCAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |