Detailed information NTG1051938

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: ACEZDF_RS03065
• Genome accession: NZ_CP169539
• Coordinates: 643480..646866 (-)
• Length: 1128 a.a.
• NCBI ID: WP_054579089.1
• Uniprot ID: -
• Organism: Vibrio alginolyticus strain BR53
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 638480..651866

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACEZDF_RS03050 (ACEZDF_03050)	-	638832..639857 (-)	1026	WP_054579088.1	ABC transporter permease	-
ACEZDF_RS03055 (ACEZDF_03055)	-	639860..640846 (-)	987	WP_005380038.1	ABC transporter permease	-
ACEZDF_RS03060 (ACEZDF_03060)	-	641017..642699 (-)	1683	WP_005380037.1	ABC transporter substrate-binding protein	-
ACEZDF_RS03065 (ACEZDF_03065)	chiS	643480..646866 (-)	3387	WP_054579089.1	response regulator	Regulator
ACEZDF_RS03070 (ACEZDF_03070)	rsmC	647093..648118 (-)	1026	WP_033905578.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
ACEZDF_RS03075 (ACEZDF_03075)	-	648195..649280 (-)	1086	WP_025768201.1	AI-2E family transporter	-
ACEZDF_RS03080 (ACEZDF_03080)	hemL	649626..650921 (-)	1296	WP_054579090.1	glutamate-1-semialdehyde 2,1-aminomutase	-
ACEZDF_RS03085 (ACEZDF_03085)	erpA	651168..651509 (+)	342	WP_005380031.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 126901.58 Da
• Isoelectric Point: 5.5653

>NTDB_id=1051938 ACEZDF_RS03065 WP_054579089.1 643480..646866(-) (chiS) [Vibrio alginolyticus strain BR53]
MFKFYKKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQIIDYFEARETEVMGFVRS
ELAYASGGRFYGLVNAFSRLGNDIEESRKNAQQRYIEGSGDQIKTSTLPESSNYVGSERYRLLHKRYHWAYLELLKRSDF
NDILLVDINGNVTYSINKDDNYGTNLLSGPYKDSALGKTFKRLADDVTERRKVNEDYTPVIVSDFELEGGKSVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLAADANRESSINTLLVGNDHQPRTINTKQDDIKNSLEVIDKALSGAFGVGTYTNGLGEE
IIAAYAPIETRGVIWALVVQLPENEAFARIHQLEKLFVIAMLIAIILVVIASHYLSNFITSPLLKLTWVAEKVSAGDLDD
TSFNTVRKDEIGRLALSFERMQRSIREKIQTIKKQNEELESNIQIIQKQNEELQLADKLKDEFLATTSHELRTPLHGMVG
IAETLASGANGAIPASQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSMDIQKSAVSLGSATRLVLELSSHLLGSKTIRI
INQVPADLKAVSADPQRLEQVLYNLIGNAIKYTSEGKIVISANVVDDHVRVQVVDTGQGIPAEQLEHIFEPLIQAGQDAS
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASEEEIQATQTLAAHGHFQIPEVNVENREDLSLPENPD
GPLLYVADDEPVNLRVLESFLRLEGYRVRTVSDGPETLALVEQEKPELLLLDIMMPGMSGYQVCSELRETYDHAELPIIM
LTALSQTEDRVRGFEAGANDYLSKPFNKQELAARIQAHLTASKAEMRHMENKVLESELRQRAVVEASLLETQGRLLEQLE
SAPEAIICLREDKRIRFANEAACKLFKRSLEQLKRSSADELIAPKYLTVKQPHYCGKIDIYIEDIRQNIEADILKLPEGS
GLDIMYIFNVGGGASAARIHNLETAVEVLSSYAFDGDKDQLQKLKELGGEFTRLADKALGNKKDKQELMREVLVDAMTHA
LEYWESVTGESKFAFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEFILEHCKEQSPERAYIEAQRD
KLQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=1051938 ACEZDF_RS03065 WP_054579089.1 643480..646866(-) (chiS) [Vibrio alginolyticus strain BR53]
ATGTTTAAATTCTACAAAAAACAGAAATTTAAGCGCCTTCAGAGTACACTGATGACCGCATTTCTGGTGCTCAGTATCAC
ACCTCTTACCATTACTGCGATCTTTTTCTTGCAGTCCCACAGTAAAGATCTGCAAGAACAAAGCACCTCGCACTTACTGT
CTGTTCGAGATACAAAACAGCAGCAAATCATCGACTACTTTGAGGCACGAGAAACCGAAGTCATGGGCTTTGTGCGCTCA
GAGTTGGCTTACGCCAGTGGTGGCCGATTCTACGGTCTCGTCAATGCTTTTAGTCGTTTAGGCAATGATATTGAAGAGTC
TCGTAAAAACGCCCAACAGCGCTACATCGAGGGCAGCGGAGACCAAATCAAAACCTCAACGTTACCCGAGTCATCCAACT
ATGTAGGAAGTGAACGTTACCGGCTTTTACATAAACGCTATCATTGGGCCTACTTAGAGCTCCTCAAGCGCTCTGATTTT
AATGACATTTTGCTGGTCGACATCAATGGTAACGTCACCTACTCGATCAACAAAGACGATAACTACGGAACGAACTTGTT
ATCAGGCCCCTACAAAGACTCGGCACTTGGCAAAACTTTCAAGCGTCTCGCCGATGATGTGACTGAACGTCGAAAAGTAA
ACGAAGACTACACTCCTGTGATTGTGTCTGACTTCGAGCTGGAAGGGGGGAAATCAGTCGCTTGGCTAGGTGCACCAATT
GTTCAGCAAGGTTATCTACACAGCTATGCCATGTTCCGCTTGCCAAATAATGGCATCACTAAGTTAGCCGCAGACGCCAA
CCGAGAGTCATCAATTAACACCTTGCTGGTTGGAAATGATCACCAACCTCGCACAATTAACACGAAACAAGACGATATTA
AGAACAGTTTAGAAGTGATCGATAAAGCACTCTCTGGTGCATTTGGTGTCGGCACTTACACAAACGGTTTAGGTGAAGAG
ATCATCGCGGCTTATGCACCGATTGAAACTCGTGGTGTGATTTGGGCGCTCGTCGTACAGTTACCAGAAAACGAAGCTTT
CGCTCGTATCCATCAACTCGAAAAACTATTCGTTATCGCTATGTTGATCGCCATTATCCTTGTGGTGATCGCTTCTCACT
ATTTATCAAACTTTATCACTTCTCCGTTGCTGAAATTGACTTGGGTTGCCGAAAAGGTCTCTGCAGGTGATCTTGATGAC
ACGTCTTTTAATACTGTTCGTAAAGATGAAATTGGTCGGCTTGCGTTAAGCTTTGAACGAATGCAACGCTCTATTCGAGA
GAAGATTCAAACCATTAAGAAGCAAAATGAAGAACTAGAAAGCAACATACAGATCATTCAAAAACAGAATGAAGAACTGC
AATTGGCCGATAAATTAAAAGATGAATTCTTAGCCACGACTTCTCATGAACTTCGTACACCGTTACACGGCATGGTCGGG
ATTGCTGAAACCTTAGCGTCCGGCGCCAATGGCGCGATCCCCGCTAGCCAGAAATATCAGCTTGATATCATCATTAAAAG
TGGTCAGCGTCTCGCTAATCTAGTCGATGACTTGTTGGATTATCATAAAATGCGTTATGGAAGCATGGATATCCAGAAAT
CAGCAGTGAGTTTGGGCAGTGCAACACGATTGGTTTTAGAGCTTTCTAGCCATTTACTTGGAAGTAAAACCATCCGCATC
ATCAACCAAGTCCCAGCGGATTTAAAAGCAGTGTCAGCTGACCCGCAACGCCTTGAACAAGTGCTATATAACCTGATTGG
CAATGCGATTAAATACACCTCAGAAGGTAAAATTGTTATCTCCGCTAATGTGGTAGATGATCATGTACGCGTACAAGTCG
TGGATACTGGACAAGGAATTCCCGCAGAACAACTTGAGCATATTTTTGAACCACTTATCCAAGCAGGGCAAGACGCGAGC
CGTTATCGTCAAGGTGCAGGGCTTGGGCTCTCCATTAGCCGGCAATTGATCGAATTAATGGGAGGCTCGTTATACGTCAG
TAGCCAACCAATGGTCGGAACTACCTTCAGTTTCACTTTACCGCTCGCCAGTGAAGAAGAAATCCAAGCAACCCAGACTC
TAGCTGCGCACGGGCACTTCCAAATTCCTGAAGTTAATGTAGAGAACCGCGAAGACTTATCACTTCCAGAGAACCCAGAC
GGCCCGTTACTGTATGTTGCTGACGATGAACCAGTAAACTTACGCGTGCTTGAAAGCTTTTTACGTTTAGAGGGCTATCG
TGTGCGTACCGTCTCCGATGGGCCAGAAACGTTAGCACTCGTCGAGCAAGAGAAGCCGGAACTTCTGTTATTGGATATCA
TGATGCCAGGCATGAGCGGCTACCAAGTTTGTAGTGAACTACGTGAAACCTATGATCATGCCGAGTTGCCAATCATTATG
CTCACCGCACTCAGTCAAACAGAAGATCGTGTAAGAGGTTTTGAAGCAGGAGCCAACGACTATTTATCGAAACCATTTAA
TAAACAAGAGTTGGCGGCACGTATCCAAGCGCATTTAACGGCAAGTAAAGCAGAAATGCGCCATATGGAAAACAAAGTGC
TAGAGTCTGAACTTAGACAGCGAGCAGTCGTTGAAGCAAGCTTACTTGAGACTCAAGGTCGTCTGTTGGAACAGCTAGAA
TCGGCTCCTGAAGCTATCATCTGTCTACGTGAAGACAAGCGTATTCGCTTTGCTAACGAAGCTGCTTGTAAGCTATTCAA
GCGCAGCTTAGAACAGCTAAAGCGCTCATCTGCTGATGAGCTGATTGCCCCTAAATATCTAACCGTCAAACAACCTCATT
ACTGTGGCAAGATTGATATCTATATTGAAGATATTCGTCAGAACATCGAAGCAGACATTCTTAAGCTCCCTGAAGGTTCA
GGGTTAGATATCATGTACATCTTTAATGTCGGCGGTGGAGCCAGTGCCGCTCGCATACATAATCTAGAAACCGCCGTAGA
AGTGCTTTCAAGTTATGCATTTGATGGTGACAAAGACCAATTACAAAAGCTAAAAGAGCTTGGCGGAGAATTTACGCGCC
TTGCAGACAAAGCGCTCGGTAATAAAAAAGACAAGCAAGAACTTATGCGAGAAGTTCTAGTAGACGCAATGACACATGCT
TTAGAGTATTGGGAATCTGTAACGGGTGAAAGTAAGTTCGCATTTGCAGAGCAAAGTGGCTTGTGGCGCGTTTATCTAGA
CCGTAGCACTTTGCAAACACGCACTTTAGATAAATACATGCGTATAGAAACATTACCCAAAACACCACGTTGGAGAACGG
TGCTAAGCTCGATAGAGTTCATTCTCGAACACTGCAAAGAACAGAGCCCCGAGAGAGCATACATAGAAGCACAACGAGAT
AAACTACAGCGACTATTGACCAGCTAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• HAMP domain (HAMP) (375-427)

• PAS fold (PAS) (876-924)

• Response regulator receiver domain (Response_reg) (726-836)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.439	100	0.765