Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ACE1EH_RS07000 Genome accession   NZ_CP169535
Coordinates   1350386..1350850 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain HJ-16     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1345386..1355850
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACE1EH_RS06980 (ACE1EH_06980) - 1345867..1347687 (+) 1821 WP_046702333.1 PAS domain-containing protein -
  ACE1EH_RS06985 (ACE1EH_06985) - 1347668..1348881 (-) 1214 Protein_1316 aminotransferase A -
  ACE1EH_RS06990 (ACE1EH_06990) - 1349082..1349243 (-) 162 WP_007409608.1 hypothetical protein -
  ACE1EH_RS06995 (ACE1EH_06995) cheV 1349432..1350343 (+) 912 WP_014304917.1 chemotaxis protein CheV -
  ACE1EH_RS07000 (ACE1EH_07000) kre 1350386..1350850 (-) 465 WP_003154622.1 YkyB family protein Regulator
  ACE1EH_RS07005 (ACE1EH_07005) - 1350973..1352265 (-) 1293 WP_375005289.1 MFS transporter -
  ACE1EH_RS07010 (ACE1EH_07010) - 1352342..1352836 (-) 495 WP_095284082.1 L,D-transpeptidase family protein -
  ACE1EH_RS07015 (ACE1EH_07015) - 1352911..1353774 (-) 864 WP_375005290.1 metallophosphoesterase -
  ACE1EH_RS07020 (ACE1EH_07020) fadH 1353918..1354682 (+) 765 WP_375005291.1 2,4-dienoyl-CoA reductase -
  ACE1EH_RS07025 (ACE1EH_07025) - 1354796..1355344 (+) 549 WP_375005292.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=1051859 ACE1EH_RS07000 WP_003154622.1 1350386..1350850(-) (kre) [Bacillus velezensis strain HJ-16]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1051859 ACE1EH_RS07000 WP_003154622.1 1350386..1350850(-) (kre) [Bacillus velezensis strain HJ-16]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAATGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment