Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   ACE4RF_RS08795 Genome accession   NZ_OZ059817
Coordinates   1731839..1732513 (-) Length   224 a.a.
NCBI ID   WP_374749796.1    Uniprot ID   -
Organism   Staphylococcus aureus isolate E6_22S00629-1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1726839..1737513
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACE4RF_RS08780 - 1728019..1729908 (-) 1890 WP_000009400.1 FtsX-like permease family protein -
  ACE4RF_RS08785 vraF 1729898..1730659 (-) 762 WP_000153733.1 ABC transporter ATP-binding protein VraF -
  ACE4RF_RS08790 graS 1730806..1731846 (-) 1041 WP_001061267.1 histidine kinase GraS/ApsS -
  ACE4RF_RS08795 braR 1731839..1732513 (-) 675 WP_374749796.1 response regulator transcription factor GraR/ApsR Regulator
  ACE4RF_RS08800 graX 1732529..1733452 (-) 924 WP_000802948.1 auxiliary protein GraX/ApsX -
  ACE4RF_RS08805 - 1733565..1734071 (+) 507 WP_000940128.1 GNAT family N-acetyltransferase -
  ACE4RF_RS08810 - 1734280..1734708 (-) 429 WP_000198503.1 hypothetical protein -
  ACE4RF_RS08815 - 1735037..1736080 (-) 1044 WP_001030759.1 alpha/beta hydrolase -
  ACE4RF_RS08820 - 1736231..1737298 (-) 1068 WP_000980142.1 membrane protein -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26048.89 Da        Isoelectric Point: 4.4019

>NTDB_id=1051787 ACE4RF_RS08795 WP_374749796.1 1731839..1732513(-) (braR) [Staphylococcus aureus isolate E6_22S00629-1]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGEQTIFLSKTEMIIL
EILVTKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEIGMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=1051787 ACE4RF_RS08795 WP_374749796.1 1731839..1732513(-) (braR) [Staphylococcus aureus isolate E6_22S00629-1]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGAACAGACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTGTTACTAAAAAAAATCAAATCGTTTCGAGAGATACAATTATTACTGCGCTATGGGATGATGAAGCATTTGT
CAGTGATAACACATTAACAGTTAATGTGAACCGATTACGTAAGAAACTATCTGAAATAGGGATGGACAGCGCAATTGAAA
CAAAAGTAGGAAAAGGATATATGGCACATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.818

98.214

0.411


Multiple sequence alignment