Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8618_RS05200 | Genome accession | NZ_AP028383 |
| Coordinates | 1010749..1011051 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain BCH-11107 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1005749..1016051
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8618_RS05175 (B11107_10070) | rpsR | 1006111..1006371 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8618_RS05180 (B11107_10080) | lon | 1006432..1008807 (-) | 2376 | WP_002868636.1 | endopeptidase La | - |
| R8618_RS05185 (B11107_10090) | - | 1008824..1009471 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| R8618_RS05190 (B11107_10100) | fliW | 1009632..1010021 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8618_RS05195 (B11107_10110) | proC | 1010021..1010752 (+) | 732 | WP_044257985.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8618_RS05200 (B11107_10120) | ctsT | 1010749..1011051 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| R8618_RS05205 (B11107_10130) | - | 1011048..1011710 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| R8618_RS05210 (B11107_10140) | - | 1011707..1012159 (+) | 453 | WP_317642139.1 | hypothetical protein | - |
| R8618_RS05215 (B11107_10150) | hemD | 1012156..1012785 (-) | 630 | WP_002858312.1 | uroporphyrinogen-III synthase | - |
| R8618_RS05220 (B11107_10160) | thiE | 1012763..1013395 (-) | 633 | WP_002858441.1 | thiamine phosphate synthase | - |
| R8618_RS05225 (B11107_10170) | thiD | 1013385..1014197 (-) | 813 | WP_002858043.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8618_RS05230 (B11107_10180) | - | 1014194..1014880 (-) | 687 | WP_002858132.1 | endonuclease III domain-containing protein | - |
| R8618_RS05235 (B11107_10190) | - | 1014877..1015638 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=105169 R8618_RS05200 WP_002853046.1 1010749..1011051(+) (ctsT) [Campylobacter jejuni strain BCH-11107]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=105169 R8618_RS05200 WP_002853046.1 1010749..1011051(+) (ctsT) [Campylobacter jejuni strain BCH-11107]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |