Detailed information NTG1051686

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ACEX67_RS17570
• Genome accession: NZ_CP169520
• Coordinates: 3573211..3574356 (+)
• Length: 381 a.a.
• NCBI ID: WP_076983500.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain CX-H3
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3568211..3579356

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACEX67_RS17550 (ACEX67_17550)	-	3568686..3569402 (-)	717	WP_003151075.1	Crp/Fnr family transcriptional regulator	-
ACEX67_RS17555 (ACEX67_17555)	narK	3569500..3570690 (-)	1191	WP_003151073.1	nitrate transporter NarK	-
ACEX67_RS17560 (ACEX67_17560)	argS	3570824..3572494 (-)	1671	WP_003151071.1	arginine--tRNA ligase	-
ACEX67_RS17565 (ACEX67_17565)	-	3572491..3572919 (-)	429	WP_003151069.1	DUF1934 domain-containing protein	-
ACEX67_RS17570 (ACEX67_17570)	rapF	3573211..3574356 (+)	1146	WP_076983500.1	tetratricopeptide repeat protein	Regulator
ACEX67_RS17575 (ACEX67_17575)	-	3574340..3574459 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
ACEX67_RS17580 (ACEX67_17580)	speB	3574582..3575454 (-)	873	WP_003151054.1	agmatinase	-
ACEX67_RS17585 (ACEX67_17585)	speE	3575514..3576344 (-)	831	WP_003151052.1	spermidine synthase	-
ACEX67_RS17590 (ACEX67_17590)	-	3576544..3578616 (+)	2073	WP_240679851.1	transglycosylase domain-containing protein	-
ACEX67_RS17595 (ACEX67_17595)	-	3578640..3579071 (-)	432	WP_057080300.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45809.36 Da
• Isoelectric Point: 5.2539

>NTDB_id=1051686 ACEX67_RS17570 WP_076983500.1 3573211..3574356(+) (rapF) [Bacillus velezensis strain CX-H3]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEEDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMARLEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=1051686 ACEX67_RS17570 WP_076983500.1 3573211..3574356(+) (rapF) [Bacillus velezensis strain CX-H3]
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAGCTTGCAGGCCTGGAAGAAGATCAGGATCTTCATCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTAGAT
TGGAACAGCAGCCGCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGCATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (188-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	53.421	99.738	0.533