Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   ACEX67_RS14690 Genome accession   NZ_CP169520
Coordinates   3006137..3006781 (-) Length   214 a.a.
NCBI ID   WP_165541257.1    Uniprot ID   -
Organism   Bacillus velezensis strain CX-H3     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3001137..3011781
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEX67_RS14655 (ACEX67_14655) - 3002322..3002753 (+) 432 WP_044052951.1 Na(+)/H(+) antiporter subunit B -
  ACEX67_RS14660 (ACEX67_14660) - 3002753..3003094 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  ACEX67_RS14665 (ACEX67_14665) - 3003087..3004568 (+) 1482 WP_014305717.1 Na+/H+ antiporter subunit D -
  ACEX67_RS14670 (ACEX67_14670) - 3004574..3005050 (+) 477 WP_003152059.1 Na+/H+ antiporter subunit E -
  ACEX67_RS14675 (ACEX67_14675) - 3005050..3005334 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  ACEX67_RS14680 (ACEX67_14680) mnhG 3005318..3005692 (+) 375 WP_015387785.1 monovalent cation/H(+) antiporter subunit G -
  ACEX67_RS14685 (ACEX67_14685) - 3005732..3006115 (-) 384 WP_139885447.1 hotdog fold thioesterase -
  ACEX67_RS14690 (ACEX67_14690) comA 3006137..3006781 (-) 645 WP_165541257.1 response regulator transcription factor Regulator
  ACEX67_RS14695 (ACEX67_14695) comP 3006862..3009168 (-) 2307 WP_069448952.1 sensor histidine kinase Regulator
  ACEX67_RS14700 (ACEX67_14700) comX 3009187..3009363 (-) 177 WP_044052947.1 competence pheromone ComX -
  ACEX67_RS14705 (ACEX67_14705) - 3009378..3010253 (-) 876 WP_026092320.1 polyprenyl synthetase family protein -
  ACEX67_RS14710 (ACEX67_14710) degQ 3010405..3010545 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  ACEX67_RS14715 (ACEX67_14715) - 3011011..3011352 (+) 342 WP_014305721.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24301.71 Da        Isoelectric Point: 4.9953

>NTDB_id=1051674 ACEX67_RS14690 WP_165541257.1 3006137..3006781(-) (comA) [Bacillus velezensis strain CX-H3]
MKKILVIDDHPAVMESTKTILETDTNLSVDCLSPDASEQFVLRHDFSAYDLILMDLNLGDDISGIELSKKILKENPLCKI
IVYTGYEVEDYFEESIRAGLHGAISKTESKEKIMQYIYHVLNGQILVDFSYFKQLMTQQKTKTSSSPQSEQDRLTPRERH
ILQEVEKGLTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDNVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=1051674 ACEX67_RS14690 WP_165541257.1 3006137..3006781(-) (comA) [Bacillus velezensis strain CX-H3]
ATGAAAAAGATACTAGTGATTGATGATCATCCGGCTGTCATGGAGAGCACCAAGACGATTCTGGAAACGGACACGAATCT
TTCTGTCGATTGCCTCAGTCCTGATGCCAGTGAACAATTCGTTCTCCGGCATGATTTTTCAGCTTACGATCTCATATTAA
TGGATTTAAATCTGGGTGATGACATCAGCGGCATCGAGCTTTCCAAGAAAATCTTAAAAGAGAATCCTCTCTGTAAAATC
ATTGTCTACACAGGCTATGAGGTTGAAGATTATTTTGAAGAATCCATCCGCGCGGGCCTGCATGGCGCCATCAGCAAAAC
CGAATCTAAAGAGAAAATCATGCAATACATATATCACGTGCTCAACGGACAGATTTTAGTTGATTTCTCCTATTTCAAAC
AGCTGATGACCCAGCAAAAAACAAAAACGTCTTCTTCCCCTCAAAGTGAGCAGGATCGGTTAACCCCGAGAGAGCGCCAT
ATTCTCCAAGAGGTCGAAAAAGGTTTGACCAATCAGGAAATCGCAGATGCGCTTCACTTAAGCAAGCGGTCGATTGAATA
CAGCCTGACATCCATTTTTAATAAGCTGAATGTCGGCTCCCGAACTGAAGCGGTGCTGATCGCCAAGTCAGATAACGTAC
TATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(153-208)

Response regulator receiver domain (Response_reg)

(4-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

85.981

100

0.86

Multiple sequence alignment