Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ACEX67_RS06880 Genome accession   NZ_CP169520
Coordinates   1349844..1350308 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain CX-H3     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1344844..1355308
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEX67_RS06860 (ACEX67_06860) - 1345324..1347144 (+) 1821 WP_003154628.1 PAS domain-containing protein -
  ACEX67_RS06865 (ACEX67_06865) - 1347120..1348339 (-) 1220 Protein_1292 aminotransferase A -
  ACEX67_RS06870 (ACEX67_06870) - 1348540..1348701 (-) 162 WP_095315360.1 hypothetical protein -
  ACEX67_RS06875 (ACEX67_06875) cheV 1348890..1349801 (+) 912 WP_014304917.1 chemotaxis protein CheV -
  ACEX67_RS06880 (ACEX67_06880) kre 1349844..1350308 (-) 465 WP_003154622.1 YkyB family protein Regulator
  ACEX67_RS06885 (ACEX67_06885) - 1350431..1351723 (-) 1293 WP_046559548.1 MFS transporter -
  ACEX67_RS06890 (ACEX67_06890) - 1351799..1352293 (-) 495 WP_088005492.1 L,D-transpeptidase family protein -
  ACEX67_RS06895 (ACEX67_06895) - 1352368..1353231 (-) 864 WP_015388306.1 metallophosphoesterase -
  ACEX67_RS06900 (ACEX67_06900) fadH 1353375..1354139 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  ACEX67_RS06905 (ACEX67_06905) - 1354249..1354797 (+) 549 Protein_1300 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=1051643 ACEX67_RS06880 WP_003154622.1 1349844..1350308(-) (kre) [Bacillus velezensis strain CX-H3]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1051643 ACEX67_RS06880 WP_003154622.1 1349844..1350308(-) (kre) [Bacillus velezensis strain CX-H3]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment