Detailed information
Bioinformatically predicted
Overview
| Name | sxy/tfoX | Type | Regulator |
| Locus tag | ACE01L_RS01275 | Genome accession | NZ_CP169515 |
| Coordinates | 258781..259386 (+) | Length | 201 a.a. |
| NCBI ID | WP_001202375.1 | Uniprot ID | A0A5I0N148 |
| Organism | Salmonella enterica subsp. enterica serovar Infantis strain FSIS4900 | ||
| Function | positive regulator of competence gene (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 225180..267646 | 258781..259386 | within | 0 |
Gene organization within MGE regions
Location: 225180..267646
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACE01L_RS01145 (ACE01L_01145) | ldtD | 225220..227067 (+) | 1848 | WP_000925896.1 | L,D-transpeptidase | - |
| ACE01L_RS01150 (ACE01L_01150) | - | 227327..227875 (+) | 549 | WP_000357052.1 | YcbK family protein | - |
| ACE01L_RS01155 (ACE01L_01155) | - | 227903..228550 (+) | 648 | WP_001109471.1 | MBL fold metallo-hydrolase | - |
| ACE01L_RS01160 (ACE01L_01160) | - | 228648..229903 (+) | 1256 | WP_086016038.1 | IS3-like element ISSen1 family transposase | - |
| ACE01L_RS01165 (ACE01L_01165) | aspC | 229927..231117 (-) | 1191 | WP_000462653.1 | aspartate transaminase | - |
| ACE01L_RS01170 (ACE01L_01170) | ompF | 231302..232393 (-) | 1092 | WP_000977709.1 | porin OmpF | - |
| ACE01L_RS01175 (ACE01L_01175) | asnS | 233000..234400 (-) | 1401 | WP_023993514.1 | asparagine--tRNA ligase | - |
| ACE01L_RS01180 (ACE01L_01180) | - | 234601..235062 (-) | 462 | WP_000762342.1 | Lrp/AsnC family transcriptional regulator | - |
| ACE01L_RS01185 (ACE01L_01185) | dpaL | 235379..236593 (+) | 1215 | WP_020438006.1 | diaminopropionate ammonia-lyase | - |
| ACE01L_RS01190 (ACE01L_01190) | - | 236839..238272 (+) | 1434 | WP_000893191.1 | sodium:alanine symporter family protein | - |
| ACE01L_RS01195 (ACE01L_01195) | pncB | 238353..239555 (-) | 1203 | WP_023993513.1 | nicotinate phosphoribosyltransferase | - |
| ACE01L_RS01200 (ACE01L_01200) | pepN | 239822..242434 (+) | 2613 | WP_023993512.1 | aminopeptidase N | - |
| ACE01L_RS01205 (ACE01L_01205) | pyrD | 242642..243652 (+) | 1011 | WP_000291723.1 | quinone-dependent dihydroorotate dehydrogenase | - |
| ACE01L_RS01210 (ACE01L_01210) | zapC | 243818..244360 (+) | 543 | WP_023993511.1 | cell division protein ZapC | - |
| ACE01L_RS01215 (ACE01L_01215) | - | 244357..245466 (-) | 1110 | WP_023993510.1 | YcbX family protein | - |
| ACE01L_RS01220 (ACE01L_01220) | rlmKL | 245565..247673 (+) | 2109 | WP_023993509.1 | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | - |
| ACE01L_RS01225 (ACE01L_01225) | - | 247686..249593 (+) | 1908 | WP_023993508.1 | ABC transporter ATP-binding protein | - |
| ACE01L_RS01230 (ACE01L_01230) | pqiA | 249608..250861 (+) | 1254 | WP_000333152.1 | membrane integrity-associated transporter subunit PqiA | - |
| ACE01L_RS01235 (ACE01L_01235) | pqiB | 250866..252506 (+) | 1641 | WP_000433414.1 | intermembrane transport protein PqiB | - |
| ACE01L_RS01240 (ACE01L_01240) | pqiC | 252503..253066 (+) | 564 | WP_000759136.1 | membrane integrity-associated transporter subunit PqiC | - |
| ACE01L_RS01245 (ACE01L_01245) | rmf | 253322..253489 (+) | 168 | WP_001537784.1 | ribosome modulation factor | - |
| ACE01L_RS01250 (ACE01L_01250) | fabA | 253589..254107 (-) | 519 | WP_000227928.1 | bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase | - |
| ACE01L_RS01255 (ACE01L_01255) | - | 254176..255936 (-) | 1761 | WP_000156457.1 | Lon protease family protein | - |
| ACE01L_RS01260 (ACE01L_01260) | matP | 256122..256574 (+) | 453 | WP_000877172.1 | macrodomain Ter protein MatP | - |
| ACE01L_RS01265 (ACE01L_01265) | ompA | 256646..257698 (-) | 1053 | WP_001670727.1 | porin OmpA | - |
| ACE01L_RS01270 (ACE01L_01270) | sulA | 258055..258564 (-) | 510 | WP_000288732.1 | SOS-induced cell division inhibitor SulA | - |
| ACE01L_RS01275 (ACE01L_01275) | sxy/tfoX | 258781..259386 (+) | 606 | WP_001202375.1 | TfoX/Sxy family DNA transformation protein | Regulator |
| ACE01L_RS01280 (ACE01L_01280) | yccS | 259373..261526 (-) | 2154 | WP_000950876.1 | YccS family putative transporter | - |
| ACE01L_RS01285 (ACE01L_01285) | - | 261545..261991 (-) | 447 | WP_023993507.1 | YccF domain-containing protein | - |
| ACE01L_RS01290 (ACE01L_01290) | helD | 262115..264169 (+) | 2055 | WP_023993506.1 | DNA helicase IV | - |
| ACE01L_RS01295 (ACE01L_01295) | mgsA | 264205..264663 (-) | 459 | WP_374986293.1 | methylglyoxal synthase | - |
| ACE01L_RS01300 (ACE01L_01300) | - | 264758..265420 (-) | 663 | WP_000847719.1 | DUF2057 family protein | - |
| ACE01L_RS01305 (ACE01L_01305) | - | 265594..266007 (+) | 414 | WP_001537782.1 | CoA-binding protein | - |
| ACE01L_RS01310 (ACE01L_01310) | hspQ | 266052..266369 (-) | 318 | WP_000561983.1 | heat shock protein HspQ | - |
| ACE01L_RS01315 (ACE01L_01315) | rlmI | 266427..267638 (-) | 1212 | WP_000140480.1 | 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI | - |
Sequence
Protein
Download Length: 201 a.a. Molecular weight: 23174.94 Da Isoelectric Point: 8.7403
>NTDB_id=1051568 ACE01L_RS01275 WP_001202375.1 258781..259386(+) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Infantis strain FSIS4900]
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG
Nucleotide
Download Length: 606 bp
>NTDB_id=1051568 ACE01L_RS01275 WP_001202375.1 258781..259386(+) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Infantis strain FSIS4900]
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTGCGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTGCGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sxy/tfoX | Escherichia coli BW25113 strain K-12 |
75.879 |
99.005 |
0.751 |