Detailed information
Bioinformatically predicted
Overview
| Name | sxy/tfoX | Type | Regulator |
| Locus tag | ACE01K_RS09505 | Genome accession | NZ_CP169501 |
| Coordinates | 1978842..1979447 (+) | Length | 201 a.a. |
| NCBI ID | WP_001202375.1 | Uniprot ID | A0A5I0N148 |
| Organism | Salmonella enterica subsp. enterica serovar Infantis strain FSIS7821 | ||
| Function | positive regulator of competence gene (predicted from homology) Competence regulation |
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Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1945242..1987707 | 1978842..1979447 | within | 0 |
Gene organization within MGE regions
Location: 1945242..1987707
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACE01K_RS09375 (ACE01K_09375) | ldtD | 1945282..1947129 (+) | 1848 | WP_000925896.1 | L,D-transpeptidase | - |
| ACE01K_RS09380 (ACE01K_09380) | - | 1947389..1947937 (+) | 549 | WP_000357052.1 | YcbK family protein | - |
| ACE01K_RS09385 (ACE01K_09385) | - | 1947965..1948612 (+) | 648 | WP_001109471.1 | MBL fold metallo-hydrolase | - |
| ACE01K_RS09390 (ACE01K_09390) | - | 1948710..1949965 (+) | 1256 | WP_086016038.1 | IS3-like element ISSen1 family transposase | - |
| ACE01K_RS09395 (ACE01K_09395) | aspC | 1949989..1951179 (-) | 1191 | WP_000462653.1 | aspartate transaminase | - |
| ACE01K_RS09400 (ACE01K_09400) | ompF | 1951363..1952454 (-) | 1092 | WP_000977709.1 | porin OmpF | - |
| ACE01K_RS09405 (ACE01K_09405) | asnS | 1953061..1954461 (-) | 1401 | WP_023993514.1 | asparagine--tRNA ligase | - |
| ACE01K_RS09410 (ACE01K_09410) | - | 1954662..1955123 (-) | 462 | WP_000762342.1 | Lrp/AsnC family transcriptional regulator | - |
| ACE01K_RS09415 (ACE01K_09415) | dpaL | 1955440..1956654 (+) | 1215 | WP_020438006.1 | diaminopropionate ammonia-lyase | - |
| ACE01K_RS09420 (ACE01K_09420) | - | 1956900..1958333 (+) | 1434 | WP_000893191.1 | sodium:alanine symporter family protein | - |
| ACE01K_RS09425 (ACE01K_09425) | pncB | 1958414..1959616 (-) | 1203 | WP_023993513.1 | nicotinate phosphoribosyltransferase | - |
| ACE01K_RS09430 (ACE01K_09430) | pepN | 1959883..1962495 (+) | 2613 | WP_023993512.1 | aminopeptidase N | - |
| ACE01K_RS09435 (ACE01K_09435) | pyrD | 1962703..1963713 (+) | 1011 | WP_000291723.1 | quinone-dependent dihydroorotate dehydrogenase | - |
| ACE01K_RS09440 (ACE01K_09440) | zapC | 1963879..1964421 (+) | 543 | WP_023993511.1 | cell division protein ZapC | - |
| ACE01K_RS09445 (ACE01K_09445) | - | 1964418..1965527 (-) | 1110 | WP_023993510.1 | YcbX family protein | - |
| ACE01K_RS09450 (ACE01K_09450) | rlmKL | 1965626..1967734 (+) | 2109 | WP_374987363.1 | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | - |
| ACE01K_RS09455 (ACE01K_09455) | - | 1967747..1969654 (+) | 1908 | WP_023993508.1 | ABC transporter ATP-binding protein | - |
| ACE01K_RS09460 (ACE01K_09460) | pqiA | 1969669..1970922 (+) | 1254 | WP_000333152.1 | membrane integrity-associated transporter subunit PqiA | - |
| ACE01K_RS09465 (ACE01K_09465) | pqiB | 1970927..1972567 (+) | 1641 | WP_374987624.1 | intermembrane transport protein PqiB | - |
| ACE01K_RS09470 (ACE01K_09470) | pqiC | 1972564..1973127 (+) | 564 | WP_000759136.1 | membrane integrity-associated transporter subunit PqiC | - |
| ACE01K_RS09475 (ACE01K_09475) | rmf | 1973383..1973550 (+) | 168 | WP_001537784.1 | ribosome modulation factor | - |
| ACE01K_RS09480 (ACE01K_09480) | fabA | 1973650..1974168 (-) | 519 | WP_000227928.1 | bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase | - |
| ACE01K_RS09485 (ACE01K_09485) | - | 1974237..1975997 (-) | 1761 | WP_000156457.1 | Lon protease family protein | - |
| ACE01K_RS09490 (ACE01K_09490) | matP | 1976183..1976635 (+) | 453 | WP_000877172.1 | macrodomain Ter protein MatP | - |
| ACE01K_RS09495 (ACE01K_09495) | ompA | 1976707..1977759 (-) | 1053 | WP_001670727.1 | porin OmpA | - |
| ACE01K_RS09500 (ACE01K_09500) | sulA | 1978116..1978625 (-) | 510 | WP_000288732.1 | SOS-induced cell division inhibitor SulA | - |
| ACE01K_RS09505 (ACE01K_09505) | sxy/tfoX | 1978842..1979447 (+) | 606 | WP_001202375.1 | TfoX/Sxy family DNA transformation protein | Regulator |
| ACE01K_RS09510 (ACE01K_09510) | yccS | 1979434..1981587 (-) | 2154 | WP_000950876.1 | YccS family putative transporter | - |
| ACE01K_RS09515 (ACE01K_09515) | - | 1981606..1982052 (-) | 447 | WP_023993507.1 | YccF domain-containing protein | - |
| ACE01K_RS09520 (ACE01K_09520) | helD | 1982176..1984230 (+) | 2055 | WP_023993506.1 | DNA helicase IV | - |
| ACE01K_RS09525 (ACE01K_09525) | mgsA | 1984266..1984724 (-) | 459 | WP_023993505.1 | methylglyoxal synthase | - |
| ACE01K_RS09530 (ACE01K_09530) | - | 1984819..1985481 (-) | 663 | WP_000847719.1 | DUF2057 family protein | - |
| ACE01K_RS09535 (ACE01K_09535) | - | 1985655..1986068 (+) | 414 | WP_001537782.1 | CoA-binding protein | - |
| ACE01K_RS09540 (ACE01K_09540) | hspQ | 1986113..1986430 (-) | 318 | WP_000561983.1 | heat shock protein HspQ | - |
| ACE01K_RS09545 (ACE01K_09545) | rlmI | 1986488..1987699 (-) | 1212 | WP_374987364.1 | 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI | - |
Sequence
Protein
Download Length: 201 a.a. Molecular weight: 23174.94 Da Isoelectric Point: 8.7403
>NTDB_id=1051431 ACE01K_RS09505 WP_001202375.1 1978842..1979447(+) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Infantis strain FSIS7821]
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG
Nucleotide
Download Length: 606 bp
>NTDB_id=1051431 ACE01K_RS09505 WP_001202375.1 1978842..1979447(+) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Infantis strain FSIS7821]
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTGCGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTGCGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sxy/tfoX | Escherichia coli BW25113 strain K-12 |
75.879 |
99.005 |
0.751 |