Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8634_RS05655 | Genome accession | NZ_AP028381 |
| Coordinates | 1083261..1083563 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain BCH-11000 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1078261..1088563
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8634_RS05630 (B11000_11060) | rpsR | 1078624..1078884 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8634_RS05635 (B11000_11070) | lon | 1078944..1081319 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| R8634_RS05640 (B11000_11080) | - | 1081336..1081983 (-) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| R8634_RS05645 (B11000_11090) | fliW | 1082144..1082533 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8634_RS05650 (B11000_11100) | proC | 1082533..1083264 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8634_RS05655 (B11000_11110) | ctsT | 1083261..1083563 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| R8634_RS05660 (B11000_11120) | - | 1083560..1084222 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| R8634_RS05665 (B11000_11130) | - | 1084219..1084671 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| R8634_RS05670 (B11000_11140) | hemD | 1084668..1085297 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| R8634_RS05675 (B11000_11150) | thiE | 1085275..1085907 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| R8634_RS05680 (B11000_11160) | thiD | 1085897..1086709 (-) | 813 | WP_002852691.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8634_RS05685 (B11000_11170) | - | 1086706..1087392 (-) | 687 | WP_052802622.1 | endonuclease III domain-containing protein | - |
| R8634_RS05690 (B11000_11180) | - | 1087389..1088150 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=105117 R8634_RS05655 WP_002853046.1 1083261..1083563(+) (ctsT) [Campylobacter jejuni strain BCH-11000]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=105117 R8634_RS05655 WP_002853046.1 1083261..1083563(+) (ctsT) [Campylobacter jejuni strain BCH-11000]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |