Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACEWX4_RS06250 | Genome accession | NZ_CP169369 |
| Coordinates | 1302145..1302516 (+) | Length | 123 a.a. |
| NCBI ID | WP_228288776.1 | Uniprot ID | - |
| Organism | Acinetobacter indicus strain AIBD14 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1297145..1307516
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEWX4_RS06220 (ACEWX4_06220) | kdsB | 1297864..1298628 (+) | 765 | WP_168398081.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| ACEWX4_RS06225 (ACEWX4_06225) | - | 1298637..1299620 (+) | 984 | WP_045795758.1 | DNA polymerase III subunit delta' | - |
| ACEWX4_RS06230 (ACEWX4_06230) | - | 1299632..1299973 (+) | 342 | WP_005177501.1 | PilZ domain-containing protein | - |
| ACEWX4_RS06235 (ACEWX4_06235) | - | 1300003..1300776 (+) | 774 | WP_374855634.1 | TatD family hydrolase | - |
| ACEWX4_RS06240 (ACEWX4_06240) | - | 1300837..1301451 (+) | 615 | WP_075166784.1 | TetR/AcrR family transcriptional regulator | - |
| ACEWX4_RS06245 (ACEWX4_06245) | - | 1301457..1302029 (+) | 573 | WP_104498691.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| ACEWX4_RS06250 (ACEWX4_06250) | xcpV | 1302145..1302516 (+) | 372 | WP_228288776.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACEWX4_RS06255 (ACEWX4_06255) | xcpW | 1302513..1303148 (+) | 636 | WP_374855637.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACEWX4_RS06260 (ACEWX4_06260) | gspK | 1303194..1304141 (+) | 948 | WP_374855639.1 | type II secretion system minor pseudopilin GspK | - |
| ACEWX4_RS06265 (ACEWX4_06265) | - | 1304289..1304885 (+) | 597 | WP_005177512.1 | 6-carboxytetrahydropterin synthase | - |
| ACEWX4_RS06270 (ACEWX4_06270) | ung | 1304927..1305640 (+) | 714 | WP_005177514.1 | uracil-DNA glycosylase | - |
| ACEWX4_RS06275 (ACEWX4_06275) | - | 1305637..1306761 (+) | 1125 | WP_005177517.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACEWX4_RS06280 (ACEWX4_06280) | tadA | 1306765..1307286 (+) | 522 | WP_205779730.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 123 a.a. Molecular weight: 13562.51 Da Isoelectric Point: 5.5255
>NTDB_id=1051059 ACEWX4_RS06250 WP_228288776.1 1302145..1302516(+) (xcpV) [Acinetobacter indicus strain AIBD14]
MAGFTLLEVMVALAIFATAAMALTQVAMQYTQSTSHAILRTKAQFVALNEQALMEIQQDWLTGTQSKQVTLQGESWQIDK
SAQPTISPNVQRVEVQVSLFNPDTGQVEAGITHLVFFNHRVAQ
MAGFTLLEVMVALAIFATAAMALTQVAMQYTQSTSHAILRTKAQFVALNEQALMEIQQDWLTGTQSKQVTLQGESWQIDK
SAQPTISPNVQRVEVQVSLFNPDTGQVEAGITHLVFFNHRVAQ
Nucleotide
Download Length: 372 bp
>NTDB_id=1051059 ACEWX4_RS06250 WP_228288776.1 1302145..1302516(+) (xcpV) [Acinetobacter indicus strain AIBD14]
ATTGCTGGTTTTACCTTGCTGGAAGTAATGGTGGCACTGGCCATTTTCGCTACAGCCGCCATGGCACTGACCCAAGTGGC
CATGCAATATACCCAGTCGACCTCTCATGCCATTTTAAGAACCAAAGCACAGTTTGTGGCCTTAAATGAACAGGCTCTAA
TGGAAATCCAACAGGACTGGCTGACGGGTACGCAATCAAAACAGGTTACCCTGCAAGGTGAAAGCTGGCAAATTGATAAA
AGCGCACAGCCGACCATTAGCCCGAATGTGCAGCGGGTAGAAGTGCAGGTCAGCTTATTTAACCCCGATACCGGTCAGGT
TGAAGCCGGCATCACCCATTTGGTGTTTTTTAATCATCGGGTGGCGCAATGA
ATTGCTGGTTTTACCTTGCTGGAAGTAATGGTGGCACTGGCCATTTTCGCTACAGCCGCCATGGCACTGACCCAAGTGGC
CATGCAATATACCCAGTCGACCTCTCATGCCATTTTAAGAACCAAAGCACAGTTTGTGGCCTTAAATGAACAGGCTCTAA
TGGAAATCCAACAGGACTGGCTGACGGGTACGCAATCAAAACAGGTTACCCTGCAAGGTGAAAGCTGGCAAATTGATAAA
AGCGCACAGCCGACCATTAGCCCGAATGTGCAGCGGGTAGAAGTGCAGGTCAGCTTATTTAACCCCGATACCGGTCAGGT
TGAAGCCGGCATCACCCATTTGGTGTTTTTTAATCATCGGGTGGCGCAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
78.151 |
96.748 |
0.756 |