Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   ACEWX4_RS02340 Genome accession   NZ_CP169369
Coordinates   496785..497663 (+) Length   292 a.a.
NCBI ID   WP_168384797.1    Uniprot ID   -
Organism   Acinetobacter indicus strain AIBD14     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 491785..502663
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEWX4_RS02310 (ACEWX4_02310) wrbA 492594..493190 (+) 597 WP_374855320.1 NAD(P)H:quinone oxidoreductase -
  ACEWX4_RS02315 (ACEWX4_02315) - 493493..493675 (+) 183 WP_045796412.1 hypothetical protein -
  ACEWX4_RS02320 (ACEWX4_02320) - 493733..494113 (-) 381 WP_005182135.1 hypothetical protein -
  ACEWX4_RS02325 (ACEWX4_02325) - 494330..494905 (-) 576 WP_005182137.1 xanthine phosphoribosyltransferase -
  ACEWX4_RS02330 (ACEWX4_02330) - 494995..495708 (-) 714 WP_005182145.1 DUF3108 domain-containing protein -
  ACEWX4_RS02335 (ACEWX4_02335) - 495862..496545 (-) 684 WP_104498991.1 hypothetical protein -
  ACEWX4_RS02340 (ACEWX4_02340) tonB2 496785..497663 (+) 879 WP_168384797.1 energy transducer TonB Machinery gene
  ACEWX4_RS02345 (ACEWX4_02345) - 497660..497950 (-) 291 WP_163169943.1 antibiotic biosynthesis monooxygenase -
  ACEWX4_RS02350 (ACEWX4_02350) ybeY 498039..498521 (-) 483 WP_005182166.1 rRNA maturation RNase YbeY -
  ACEWX4_RS02355 (ACEWX4_02355) - 498541..499614 (-) 1074 WP_016659561.1 PhoH family protein -
  ACEWX4_RS02360 (ACEWX4_02360) miaB 499656..501110 (-) 1455 WP_005182171.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 292 a.a.        Molecular weight: 33054.74 Da        Isoelectric Point: 9.1867

>NTDB_id=1051051 ACEWX4_RS02340 WP_168384797.1 496785..497663(+) (tonB2) [Acinetobacter indicus strain AIBD14]
MLKKFHFAPLTQQWWKDPLFGTVLTLAALSHLAVLTVQFVMPQQSDAAVKEIAVSLRPSATEIKDADFLAQADQQGSGTF
REAHRMSSDMPAPMIEQSAGDQQLESLERLQQQRELSFEEKVLMTTLSWQKQAAENQRKKALEELNSQFQAKAAMVASLE
AQYLQRQQNFSRQQKIKTVDGIQAKQDVAAGYLEKFRQKVEFYGNRYYPEAAKQQQLAGEVRLMVILNANGGIRAIRLIE
SSGHTMLDEAAKASVRKAAPFGAFDAKMKDISELRIIRTWRFDPAEAEFEVR

Nucleotide


Download         Length: 879 bp        

>NTDB_id=1051051 ACEWX4_RS02340 WP_168384797.1 496785..497663(+) (tonB2) [Acinetobacter indicus strain AIBD14]
ATGTTAAAGAAATTTCATTTTGCACCTTTGACGCAGCAGTGGTGGAAAGATCCACTATTTGGCACCGTACTGACGCTGGC
GGCACTTTCGCATCTGGCTGTGTTAACGGTGCAATTTGTCATGCCACAGCAAAGCGATGCCGCGGTCAAGGAAATTGCAG
TCAGCTTAAGACCAAGTGCCACCGAAATTAAGGATGCCGACTTTTTAGCACAGGCCGACCAGCAGGGTTCTGGCACCTTC
CGGGAAGCGCACCGCATGTCCAGCGATATGCCCGCACCAATGATTGAACAGAGTGCCGGTGATCAGCAGCTGGAAAGTCT
GGAGCGTTTGCAGCAGCAGCGTGAACTGAGCTTTGAAGAAAAAGTGCTAATGACCACCTTAAGCTGGCAAAAGCAGGCGG
CGGAAAACCAGCGTAAAAAAGCGCTGGAAGAATTAAACAGCCAGTTTCAGGCCAAAGCGGCGATGGTGGCCAGTCTGGAA
GCGCAGTATTTACAGCGTCAGCAAAATTTCAGCCGTCAGCAGAAAATTAAAACCGTAGATGGAATTCAGGCCAAGCAGGA
TGTCGCAGCCGGTTATCTGGAAAAATTCCGTCAGAAAGTCGAATTTTATGGTAACCGTTATTATCCGGAAGCGGCCAAGC
AGCAACAGTTGGCCGGTGAGGTGCGTTTAATGGTGATTTTAAATGCCAACGGTGGGATTCGTGCGATTCGTTTAATTGAA
AGCTCGGGGCATACCATGCTGGATGAAGCTGCCAAGGCTTCTGTGCGTAAAGCTGCTCCTTTTGGTGCCTTTGATGCCAA
GATGAAAGATATTTCCGAGCTACGTATTATCCGGACCTGGCGTTTTGACCCGGCTGAGGCGGAGTTTGAGGTGCGCTAG

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(205-282)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

76.344

95.548

0.729

Multiple sequence alignment