Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   ACEWX4_RS01760 Genome accession   NZ_CP169369
Coordinates   376423..378645 (-) Length   740 a.a.
NCBI ID   WP_374855296.1    Uniprot ID   -
Organism   Acinetobacter indicus strain AIBD14     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 371423..383645
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEWX4_RS01735 (ACEWX4_01735) - 371644..371913 (-) 270 WP_034598128.1 YdcH family protein -
  ACEWX4_RS01740 (ACEWX4_01740) - 371990..372328 (-) 339 WP_005181858.1 chaperone modulator CbpM -
  ACEWX4_RS01745 (ACEWX4_01745) - 372732..373193 (-) 462 WP_005181860.1 DUF2147 domain-containing protein -
  ACEWX4_RS01750 (ACEWX4_01750) - 373605..374480 (-) 876 WP_005181862.1 Hsp33 family molecular chaperone HslO -
  ACEWX4_RS01755 (ACEWX4_01755) - 374531..376372 (-) 1842 WP_016659637.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  ACEWX4_RS01760 (ACEWX4_01760) priA 376423..378645 (-) 2223 WP_374855296.1 primosomal protein N' Machinery gene
  ACEWX4_RS01765 (ACEWX4_01765) gspF 378797..380002 (+) 1206 WP_005181870.1 type II secretion system inner membrane protein GspF -
  ACEWX4_RS01770 (ACEWX4_01770) gspG 380054..380491 (+) 438 WP_005181871.1 type II secretion system major pseudopilin GspG -
  ACEWX4_RS01775 (ACEWX4_01775) - 380771..381106 (+) 336 WP_045795389.1 hypothetical protein -
  ACEWX4_RS01780 (ACEWX4_01780) lnt 381257..382816 (-) 1560 WP_168397951.1 apolipoprotein N-acyltransferase -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 84172.27 Da        Isoelectric Point: 8.7949

>NTDB_id=1051050 ACEWX4_RS01760 WP_374855296.1 376423..378645(-) (priA) [Acinetobacter indicus strain AIBD14]
MPNSPVHPAPIYRVRVAVPVYLHDGFDYMLSAAEYQQAAVGARVLVSFGRQNLVGIIIEKLPPDHPLDPKIKLKAISELL
DQQPILDQKVLTLLTWSAQYYQFPIGEVMHSALPSLLRQGRPYNLLARMWKLLDDQAEAKLKRSEKQQEAYKVLKLHPSG
TSENILNLAGIETATLKALEKKQICYCDLEQQDFSPVPMTLAQMPLTPNSDQKQAIETVLKAQHRYQAFLLDGLTGSGKT
EVYLQIMQEVLKQGKQVLVLVPEIGLTPQTISRFQSRFHCHIALLHSGLNDSKRLQAWQAAQTGKASIILGTRSAIYTPL
PNLGLIILDEEHDLSFKQQEGFRYHARDVALYRAHLEHCPVILGSATPSIDSYALTEQGKMIRLELNQRAGPALMPKIHI
IDLKVAQKQQGLSLLLIQEIKKRLQKKEQVLIFLNRRGYAPVLVCDSCGWQAQCPHCDANFTLHHSPYTHLHCHHCGTIH
RKPEQCPQCQHSELKTLGMGTAKVEENLQHLFPDYEVVRVDRDSTSRVGSWQKIYDRIQTSQPLILLGTQMLAKGHHFPY
VTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGDVYLQTLRPDHPLLSTLVEQDYRAFARQTLKERQAALL
PPFRYTALIRCESKSQEQNQQFLQQHAQWLRENSEQLIDIWGPIPAPMERKAGRYQAHLVLLSQDRARLHFYLRAWWQNM
LHHKPSNMKLSLDIDPQEFS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=1051050 ACEWX4_RS01760 WP_374855296.1 376423..378645(-) (priA) [Acinetobacter indicus strain AIBD14]
ATGCCAAATTCGCCCGTCCATCCCGCCCCCATCTACCGTGTTCGTGTAGCTGTTCCGGTCTATCTGCATGACGGGTTTGA
CTATATGCTCAGTGCGGCTGAATATCAGCAGGCTGCCGTTGGCGCGCGGGTGCTGGTGTCCTTTGGCCGGCAGAATCTGG
TGGGCATCATTATTGAAAAACTCCCGCCCGATCATCCGCTTGACCCCAAGATTAAACTGAAAGCCATTAGCGAGCTGCTC
GACCAGCAGCCAATTCTAGATCAGAAAGTTTTAACTTTGTTGACATGGTCGGCGCAGTATTATCAGTTTCCGATTGGCGA
AGTGATGCATAGCGCCCTGCCCAGCCTGTTACGTCAGGGACGCCCGTATAATTTACTGGCACGAATGTGGAAACTGCTGG
ATGATCAGGCCGAAGCCAAACTGAAGCGCTCCGAGAAGCAGCAGGAGGCTTATAAAGTCCTGAAGCTGCATCCGAGCGGG
ACTTCAGAAAATATCCTGAATCTGGCCGGTATTGAAACTGCAACCTTAAAAGCGCTGGAAAAAAAGCAGATTTGCTACTG
CGATCTGGAGCAGCAGGATTTTAGCCCAGTGCCAATGACGCTGGCGCAAATGCCGTTAACCCCGAACAGCGACCAGAAAC
AGGCCATTGAAACCGTACTGAAAGCACAGCATCGTTATCAGGCCTTTTTACTCGATGGTCTGACCGGCAGTGGTAAAACC
GAAGTCTATCTGCAAATCATGCAGGAAGTGCTAAAACAGGGTAAACAGGTATTGGTGCTGGTGCCGGAAATTGGCCTGAC
TCCTCAAACCATTAGCCGCTTCCAGTCACGTTTTCACTGTCATATTGCGCTGCTGCATTCCGGTTTAAATGACAGCAAAC
GTCTGCAGGCCTGGCAGGCCGCCCAGACTGGCAAGGCTTCGATTATTCTTGGTACACGCTCGGCAATTTATACCCCGCTG
CCCAATCTGGGGCTGATTATTCTGGATGAAGAACACGACCTGTCATTTAAACAGCAGGAAGGCTTTCGTTACCATGCCCG
TGATGTAGCCTTATACCGTGCTCATTTAGAACACTGCCCGGTGATTCTCGGTTCAGCCACGCCCAGCATTGACAGCTATG
CCTTAACGGAACAGGGTAAAATGATCCGTCTGGAACTGAACCAGCGTGCCGGCCCGGCACTGATGCCGAAAATTCACATC
ATTGATTTAAAAGTTGCGCAAAAGCAGCAAGGTCTAAGCCTGCTGCTGATTCAGGAAATCAAAAAACGCCTGCAGAAAAA
AGAACAGGTGCTGATTTTCTTAAACCGCCGTGGTTATGCACCGGTGCTGGTCTGTGACAGCTGCGGCTGGCAGGCACAAT
GCCCACACTGTGATGCCAACTTTACCCTGCATCATAGTCCATATACCCATCTGCATTGCCATCATTGTGGCACCATTCAC
CGCAAGCCGGAGCAATGCCCGCAGTGCCAGCATAGCGAACTGAAAACCCTGGGCATGGGCACGGCCAAGGTTGAAGAAAA
CCTGCAACATCTGTTCCCGGACTATGAGGTGGTGCGGGTAGACCGCGATTCCACCAGCCGCGTCGGCAGCTGGCAAAAAA
TTTATGACCGCATTCAAACCAGCCAGCCACTGATTCTGCTTGGCACCCAAATGCTGGCCAAAGGGCATCATTTTCCTTAT
GTCACCTTAGTAGCGATTTTGGATATTGATGCCGGCCTGTTAAGTGTTGATATCCGGGCGCCAGAGCGGACTGCGCAGCT
GATTGTGCAGGTGGCCGGTCGTGCCGGCCGCGGTGAACATAAAGGCGATGTCTATTTACAGACCCTGCGTCCTGATCATC
CGCTGCTGAGCACCCTGGTCGAGCAGGATTATCGTGCCTTTGCCCGGCAAACCTTAAAAGAACGTCAGGCCGCCCTGCTG
CCCCCGTTTCGCTATACCGCCCTGATTCGCTGCGAATCCAAAAGTCAGGAGCAGAACCAGCAGTTTTTACAGCAACATGC
CCAGTGGCTGCGAGAAAATTCTGAACAGTTAATTGATATCTGGGGCCCGATTCCGGCGCCAATGGAACGCAAGGCCGGCC
GCTATCAGGCGCATCTGGTGCTGTTGTCGCAAGATCGCGCCCGTTTACATTTTTATCTACGTGCATGGTGGCAAAATATG
TTGCATCACAAGCCATCAAATATGAAACTTAGCTTAGATATAGACCCTCAGGAATTCAGTTAA

Domains

Predicted by InterproScan.

Primosomal protein N C-terminal domain (PriA_C)

(642-736)

Type III restriction enzyme, res subunit (ResIII)

(207-369)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

73.315

100

0.735

Multiple sequence alignment