Detailed information    

insolico Bioinformatically predicted

Overview


Name   hns   Type   Regulator
Locus tag   ACEWX4_RS01280 Genome accession   NZ_CP169369
Coordinates   268955..269281 (+) Length   108 a.a.
NCBI ID   WP_075167809.1    Uniprot ID   A0A7S7AEC3
Organism   Acinetobacter indicus strain AIBD14     
Function   repress the expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 263955..274281
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEWX4_RS01255 (ACEWX4_01255) hemC 264634..265551 (+) 918 WP_034598116.1 hydroxymethylbilane synthase -
  ACEWX4_RS01260 (ACEWX4_01260) - 265553..266332 (+) 780 WP_075167812.1 uroporphyrinogen-III synthase -
  ACEWX4_RS01265 (ACEWX4_01265) - 266329..267174 (+) 846 WP_374855273.1 hypothetical protein -
  ACEWX4_RS01270 (ACEWX4_01270) - 267177..268370 (+) 1194 WP_127799618.1 heme biosynthesis protein HemY -
  ACEWX4_RS01275 (ACEWX4_01275) - 268381..268809 (+) 429 WP_374855274.1 acyl-CoA thioesterase -
  ACEWX4_RS01280 (ACEWX4_01280) hns 268955..269281 (+) 327 WP_075167809.1 H-NS family nucleoid-associated regulatory protein Regulator
  ACEWX4_RS01285 (ACEWX4_01285) gspN 269445..270185 (+) 741 WP_104473370.1 type II secretion system protein N -
  ACEWX4_RS01290 (ACEWX4_01290) - 270185..271021 (+) 837 WP_160241692.1 type II secretion system protein N -
  ACEWX4_RS01295 (ACEWX4_01295) gspD 271062..273311 (+) 2250 WP_374855276.1 type II secretion system secretin GspD -
  ACEWX4_RS01300 (ACEWX4_01300) - 273378..274085 (+) 708 WP_160241690.1 FHA domain-containing protein -

Sequence


Protein


Download         Length: 108 a.a.        Molecular weight: 12271.00 Da        Isoelectric Point: 8.4694

>NTDB_id=1051046 ACEWX4_RS01280 WP_075167809.1 268955..269281(+) (hns) [Acinetobacter indicus strain AIBD14]
MMPDISNLSVEQLKRLQEEAEALIASKKDQAVEDAYNQILAIAENAGLSIEQILEFGASKRKKNVRKSVEPRYRNKTNAN
ETWTGRGKQPRWLVAELEKGAKLEDFLI

Nucleotide


Download         Length: 327 bp        

>NTDB_id=1051046 ACEWX4_RS01280 WP_075167809.1 268955..269281(+) (hns) [Acinetobacter indicus strain AIBD14]
ATGATGCCCGATATTAGTAATTTGTCTGTAGAACAATTAAAGCGCTTGCAGGAAGAAGCGGAAGCATTAATTGCATCGAA
AAAGGACCAGGCAGTTGAAGATGCATATAATCAGATTTTGGCAATTGCTGAAAATGCGGGTTTAAGCATTGAACAGATTC
TTGAGTTTGGTGCGTCTAAACGTAAAAAGAATGTACGTAAATCGGTAGAGCCGCGTTATCGTAATAAAACCAATGCCAAT
GAAACCTGGACAGGTCGTGGTAAGCAACCGCGCTGGTTAGTGGCAGAACTGGAAAAAGGTGCCAAGCTTGAAGACTTCTT
GATCTAA

Domains


Predicted by InterproScan.

(12-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7S7AEC3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hns Acinetobacter baumannii strain A118

85.185

100

0.852


Multiple sequence alignment