Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACEY3X_RS09630 Genome accession   NZ_CP169350
Coordinates   2040994..2041599 (+) Length   201 a.a.
NCBI ID   WP_001202375.1    Uniprot ID   A0A5I0N148
Organism   Salmonella enterica strain SA50     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2035994..2046599
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEY3X_RS09610 (ACEY3X_09610) - 2036389..2038149 (-) 1761 WP_076741510.1 Lon protease family protein -
  ACEY3X_RS09615 (ACEY3X_09615) matP 2038335..2038787 (+) 453 WP_000877172.1 macrodomain Ter protein MatP -
  ACEY3X_RS09620 (ACEY3X_09620) ompA 2038859..2039911 (-) 1053 WP_001670727.1 porin OmpA -
  ACEY3X_RS09625 (ACEY3X_09625) sulA 2040268..2040777 (-) 510 WP_000288732.1 SOS-induced cell division inhibitor SulA -
  ACEY3X_RS09630 (ACEY3X_09630) sxy/tfoX 2040994..2041599 (+) 606 WP_001202375.1 TfoX/Sxy family DNA transformation protein Regulator
  ACEY3X_RS09635 (ACEY3X_09635) yccS 2041586..2043739 (-) 2154 WP_000950861.1 YccS family putative transporter -
  ACEY3X_RS09640 (ACEY3X_09640) - 2043758..2044204 (-) 447 WP_001261222.1 YccF domain-containing protein -
  ACEY3X_RS09645 (ACEY3X_09645) helD 2044328..2046382 (+) 2055 WP_076741511.1 DNA helicase IV -

Sequence

Protein


Download         Length: 201 a.a.        Molecular weight: 23174.94 Da        Isoelectric Point: 8.7403

>NTDB_id=1050769 ACEY3X_RS09630 WP_001202375.1 2040994..2041599(+) (sxy/tfoX) [Salmonella enterica strain SA50]
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG

Nucleotide


Download         Length: 606 bp        

>NTDB_id=1050769 ACEY3X_RS09630 WP_001202375.1 2040994..2041599(+) (sxy/tfoX) [Salmonella enterica strain SA50]
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTCTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTCATGAAATGCGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTACGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5I0N148

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

75.879

99.005

0.751

Multiple sequence alignment