Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   ACEY3Y_RS08200 Genome accession   NZ_CP169346
Coordinates   1695688..1696293 (+) Length   201 a.a.
NCBI ID   WP_001202375.1    Uniprot ID   A0A5I0N148
Organism   Salmonella enterica strain SA74     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 1690688..1701293
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEY3Y_RS08180 (ACEY3Y_08180) - 1691077..1692837 (-) 1761 WP_000156447.1 Lon protease family protein -
  ACEY3Y_RS08185 (ACEY3Y_08185) matP 1693023..1693475 (+) 453 WP_000877172.1 macrodomain Ter protein MatP -
  ACEY3Y_RS08190 (ACEY3Y_08190) ompA 1693547..1694605 (-) 1059 WP_001747676.1 porin OmpA -
  ACEY3Y_RS08195 (ACEY3Y_08195) sulA 1694962..1695471 (-) 510 WP_000288732.1 SOS-induced cell division inhibitor SulA -
  ACEY3Y_RS08200 (ACEY3Y_08200) sxy/tfoX 1695688..1696293 (+) 606 WP_001202375.1 TfoX/Sxy family DNA transformation protein Regulator
  ACEY3Y_RS08205 (ACEY3Y_08205) yccS 1696280..1698433 (-) 2154 WP_000950862.1 YccS family putative transporter -
  ACEY3Y_RS08210 (ACEY3Y_08210) - 1698452..1698898 (-) 447 WP_001261222.1 YccF domain-containing protein -
  ACEY3Y_RS08215 (ACEY3Y_08215) helD 1699022..1701076 (+) 2055 WP_000420499.1 DNA helicase IV -

Sequence


Protein


Download         Length: 201 a.a.        Molecular weight: 23174.94 Da        Isoelectric Point: 8.7403

>NTDB_id=1050724 ACEY3Y_RS08200 WP_001202375.1 1695688..1696293(+) (sxy/tfoX) [Salmonella enterica strain SA74]
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG

Nucleotide


Download         Length: 606 bp        

>NTDB_id=1050724 ACEY3Y_RS08200 WP_001202375.1 1695688..1696293(+) (sxy/tfoX) [Salmonella enterica strain SA74]
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTGCGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5I0N148

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

75.879

99.005

0.751


Multiple sequence alignment