Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R9A00_RS05335 | Genome accession | NZ_AP028376 |
| Coordinates | 1021682..1021984 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain BCH-10927 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1016682..1026984
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R9A00_RS05310 (B10927_10410) | rpsR | 1017044..1017304 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R9A00_RS05315 (B10927_10420) | lon | 1017365..1019740 (-) | 2376 | WP_317729309.1 | endopeptidase La | - |
| R9A00_RS05320 (B10927_10430) | - | 1019757..1020404 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| R9A00_RS05325 (B10927_10440) | fliW | 1020565..1020954 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R9A00_RS05330 (B10927_10450) | proC | 1020954..1021685 (+) | 732 | WP_060816226.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R9A00_RS05335 (B10927_10460) | ctsT | 1021682..1021984 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| R9A00_RS05340 (B10927_10470) | - | 1021981..1022643 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| R9A00_RS05345 (B10927_10480) | - | 1022640..1023092 (+) | 453 | WP_002919943.1 | hypothetical protein | - |
| R9A00_RS05350 (B10927_10490) | hemD | 1023089..1023718 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| R9A00_RS05355 (B10927_10500) | thiE | 1023696..1024328 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| R9A00_RS05360 (B10927_10510) | thiD | 1024318..1025130 (-) | 813 | WP_002919944.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R9A00_RS05365 (B10927_10520) | - | 1025127..1025813 (-) | 687 | WP_100623923.1 | endonuclease III domain-containing protein | - |
| R9A00_RS05370 (B10927_10530) | - | 1025810..1026571 (-) | 762 | WP_100623922.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=105047 R9A00_RS05335 WP_002853046.1 1021682..1021984(+) (ctsT) [Campylobacter jejuni strain BCH-10927]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=105047 R9A00_RS05335 WP_002853046.1 1021682..1021984(+) (ctsT) [Campylobacter jejuni strain BCH-10927]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |